Research Output 2012 2019

2019
1 Citation (Scopus)

Chickspress: a resource for chicken gene expression

McCarthy, F. M., Pendarvis, K., Cooksey, A. M., Gresham, C. R., Bomhoff, M., Davey, S., Lyons, E. H., Sonstegard, T. S., Bridges, S. M. & Burgess, S. C., Jan 1 2019, In : Database : the journal of biological databases and curation. 2019

Research output: Contribution to journalArticle

Open Access
Gene expression
Chickens
Genes
chickens
Gene Expression
2018
10 Citations (Scopus)

Comparative omics and feeding manipulations in chicken indicate a shift of the endocrine role of visceral fat towards reproduction

Bornelöv, S., Seroussi, E., Yosefi, S., Benjamini, S., Miyara, S., Ruzal, M., Grabherr, M., Rafati, N., Molin, A. M., Pendavis, K., Burgess, S. C., Andersson, L. & Friedman-Einat, M., Apr 26 2018, In : BMC Genomics. 19, 1, 1 p.

Research output: Contribution to journalArticle

Intra-Abdominal Fat
Reproduction
Chickens
Adipokines
RNA
2017
21 Citations (Scopus)

Correspondence on Lovell et al. Identification of chicken genes previously assumed to be evolutionarily lost

Bornelöv, S., Seroussi, E., Yosefi, S., Pendavis, K., Burgess, S. C., Grabherr, M., Friedman-Einat, M. & Andersson, L., Jun 14 2017, In : Genome Biology. 18, 1, 112.

Research output: Contribution to journalLetter

Chickens
chickens
gene
Genes
genes
2016
2 Citations (Scopus)

In defense of funding new US veterinary schools

Buntain, B., Dial, S., Besselsen, D. G. & Burgess, S. C., May 1 2016, In : Journal of the American Veterinary Medical Association. 248, 9, p. 989-990 2 p.

Research output: Contribution to journalLetter

Veterinary Schools
Training Support
rural population
Salaries and Fringe Benefits
Vulnerable Populations
2015
100 Citations (Scopus)

Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

The FAANG Consortium, Mar 25 2015, In : Genome Biology. 16, 1, 57.

Research output: Contribution to journalArticle

genome
Genome
animal
Domestic Animals
animals
6 Citations (Scopus)

Systems toxicology identifies mechanistic impacts of 2-amino-4,6-dinitrotoluene (2A-DNT) exposure in Northern Bobwhite

Gust, K. A., Nanduri, B., Rawat, A., Wilbanks, M. S., Ang, C. Y., Johnson, D. R., Pendarvis, K., Chen, X., Quinn, M. J., Johnson, M. S., Burgess, S. C. & Perkins, E. J., Aug 7 2015, In : BMC Genomics. 16, 1, 587.

Research output: Contribution to journalArticle

Colinus
Toxicology
Peroxisome Proliferator-Activated Receptors
Liver
Proteins
41 Citations (Scopus)

Third Report on Chicken Genes and Chromosomes 2015

Schmid, M., Smith, J., Burt, D. W., Aken, B. L., Antin, P. B., Archibald, A. L., Ashwell, C., Blackshear, P. J., Boschiero, C., Brown, C. T., Burgess, S. C., Cheng, H. H., Chow, W., Coble, D. J., Cooksey, A., Crooijmans, R. P. M. A., Damas, J., Davis, R. V. N., De Koning, D. J., Delany, M. E. & 84 others, Derrien, T., Desta, T. T., Dunn, I. C., Dunn, M., Ellegren, H., Eöry, L., Erb, I., Farré, M., Fasold, M., Fleming, D., Flicek, P., Fowler, K. E., Frésard, L., Froman, D. P., Garceau, V., Gardner, P. P., Gheyas, A. A., Griffin, D. K., Groenen, M. A. M., Haaf, T., Hanotte, O., Hart, A., Häsler, J., Hedges, S. B., Hertel, J., Howe, K., Hubbard, A., Hume, D. A., Kaiser, P., Kedra, D., Kemp, S. J., Klopp, C., Kniel, K. E., Kuo, R., Lagarrigue, S., Lamont, S. J., Larkin, D. M., Lawal, R. A., Markland, S. M., McCarthy, F. M., McCormack, H. A., McPherson, M. C., Motegi, A., Muljo, S. A., Münsterberg, A., Nag, R., Nanda, I., Neuberger, M., Nitsche, A., Notredame, C., Noyes, H., O'Connor, R., O'Hare, E. A., Oler, A. J., Ommeh, S. C., Pais, H., Persia, M., Pitel, F., Preeyanon, L., Prieto Barja, P., Pritchett, E. M., Rhoads, D. D., Robinson, C. M., Romanov, M. N., Rothschild, M., Roux, P. F., Schmidt, C. J., Schneider, A. S., Schwartz, M. G., Searle, S. M., Skinner, M. A., Smith, C. A., Stadler, P. F., Steeves, T. E., Steinlein, C., Sun, L., Takata, M., Ulitsky, I., Wang, Q., Wang, Y., Warren, W. C., Wood, J. M. D., Wragg, D. & Zhou, H., Aug 20 2015, In : Cytogenetic and Genome Research. 145, 2, p. 78-179 102 p.

Research output: Contribution to journalArticle

2014

Avian Proteomics

Kunec, D. & Burgess, S. C., Sep 1 2014, Sturkie's Avian Physiology: Sixth Edition. Elsevier Inc., p. 25-37 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Proteomics
Genome
Proteins
RNA
Biological Phenomena
23 Citations (Scopus)

Genome sequence of the oleaginous yeast Rhodotorula glutinis ATCC 204091

Paul, D., Magbanua, Z., Arick, M., French, T., Bridges, S. M., Burgess, S. C. & Lawrence, M. L., 2014, In : Genome Announcements. 2, 1, e00046-14.

Research output: Contribution to journalArticle

Rhodotorula
Carbon
Yeasts
Genome
Carotenoids
14 Citations (Scopus)

Proteogenomic mapping of Mycoplasma hyopneumoniae virulent strain 232

Pendarvis, K., Padula, M. P., Tacchi, J. L., Petersen, A. C., Djordjevic, S. P., Burgess, S. C. & Minion, F. C., Jul 8 2014, In : BMC Genomics. 15, 1, 576.

Research output: Contribution to journalArticle

Mycoplasma hyopneumoniae
Genes
Swine Diseases
Genome
Proteins
138 Citations (Scopus)

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

Green, R. E., Braun, E. L., Armstrong, J., Earl, D., Nguyen, N., Hickey, G., Vandewege, M. W., St John, J. A., Capella-Gutiérrez, S., Castoe, T. A., Kern, C., Fujita, M. K., Opazo, J. C., Jurka, J., Kojima, K. K., Caballero, J., Hubley, R. M., Smit, A. F., Platt, R. N., Lavoie, C. A. & 35 others, Ramakodi, M. P., Finger, J. W., Suh, A., Isberg, S. R., Miles, L., Chong, A. Y., Jaratlerdsiri, W., Gongora, J., Moran, C., Iriarte, A., McCormack, J., Burgess, S. C., Edwards, S. V., Lyons, E. H., Williams, C., Breen, M., Howard, J. T., Gresham, C. R., Peterson, D. G., Schmitz, J., Pollock, D. D., Haussler, D., Triplett, E. W., Zhang, G., Irie, N., Jarvis, E. D., Brochu, C. A., Schmidt, C. J., McCarthy, F. M., Faircloth, B. C., Hoffmann, F. G., Glenn, T. C., Gabaldón, T., Paten, B. & Ray, D. A., Dec 12 2014, In : Science. 346, 6215, p. 1254449 1 p.

Research output: Contribution to journalArticle

Birds
Alligators and Crocodiles
Genome
Dinosaurs
Synteny
2013
8 Citations (Scopus)

Ultrasonic Incisions Produce Less Inflammatory Mediator Response during Early Healing than Electrosurgical Incisions

Nanduri, B., Pendarvis, K., Shack, L. A., Kumar, R., Clymer, J. W., Korvick, D. L. & Burgess, S. C., Sep 18 2013, In : PLoS One. 8, 9, e73032.

Research output: Contribution to journalArticle

Electrosurgery
Ultrasonics
ultrasonics
inflammation
Tissue
2012
13 Citations (Scopus)

Nuclear Factor kappa B is central to Marek's Disease herpesvirus induced neoplastic transformation of CD30 expressing lymphocytes in-vivo

Kumar, S., Kunec, D., Buza, J. J., Chiang, H. I., Zhou, H., Subramaniam, S., Pendarvis, K., Cheng, H. H. & Burgess, S. C., Sep 14 2012, In : BMC Systems Biology. 6, 123.

Research output: Contribution to journalArticle

Marek Disease
Lymphocytes
NF-kappa B
Herpesviridae
Lymphoma
18 Citations (Scopus)

RNA-Seq based transcriptional map of bovine respiratory disease pathogen "Histophilus somni 2336"

Kumar, R., Lawrence, M. L., Watt, J., Cooksey, A. M., Burgess, S. C. & Nanduri, B., Jan 20 2012, In : PLoS One. 7, 1, e29435.

Research output: Contribution to journalArticle

Pasteurellaceae
Cattle Diseases
bovine respiratory disease
Pulmonary diseases
Pathogens