Research Output 2012 2019

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Article
2019
1 Citation (Scopus)

Chickspress: a resource for chicken gene expression

McCarthy, F. M., Pendarvis, K., Cooksey, A. M., Gresham, C. R., Bomhoff, M., Davey, S., Lyons, E. H., Sonstegard, T. S., Bridges, S. M. & Burgess, S. C., Jan 1 2019, In : Database : the journal of biological databases and curation. 2019

Research output: Contribution to journalArticle

Open Access
Gene expression
Chickens
Genes
chickens
Gene Expression
2018
10 Citations (Scopus)

Comparative omics and feeding manipulations in chicken indicate a shift of the endocrine role of visceral fat towards reproduction

Bornelöv, S., Seroussi, E., Yosefi, S., Benjamini, S., Miyara, S., Ruzal, M., Grabherr, M., Rafati, N., Molin, A. M., Pendavis, K., Burgess, S. C., Andersson, L. & Friedman-Einat, M., Apr 26 2018, In : BMC Genomics. 19, 1, 1 p.

Research output: Contribution to journalArticle

Intra-Abdominal Fat
Reproduction
Chickens
Adipokines
RNA
2015
100 Citations (Scopus)

Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

The FAANG Consortium, Mar 25 2015, In : Genome Biology. 16, 1, 57.

Research output: Contribution to journalArticle

genome
Genome
animal
Domestic Animals
animals
6 Citations (Scopus)

Systems toxicology identifies mechanistic impacts of 2-amino-4,6-dinitrotoluene (2A-DNT) exposure in Northern Bobwhite

Gust, K. A., Nanduri, B., Rawat, A., Wilbanks, M. S., Ang, C. Y., Johnson, D. R., Pendarvis, K., Chen, X., Quinn, M. J., Johnson, M. S., Burgess, S. C. & Perkins, E. J., Aug 7 2015, In : BMC Genomics. 16, 1, 587.

Research output: Contribution to journalArticle

Colinus
Toxicology
Peroxisome Proliferator-Activated Receptors
Liver
Proteins
41 Citations (Scopus)

Third Report on Chicken Genes and Chromosomes 2015

Schmid, M., Smith, J., Burt, D. W., Aken, B. L., Antin, P. B., Archibald, A. L., Ashwell, C., Blackshear, P. J., Boschiero, C., Brown, C. T., Burgess, S. C., Cheng, H. H., Chow, W., Coble, D. J., Cooksey, A., Crooijmans, R. P. M. A., Damas, J., Davis, R. V. N., De Koning, D. J., Delany, M. E. & 84 others, Derrien, T., Desta, T. T., Dunn, I. C., Dunn, M., Ellegren, H., Eöry, L., Erb, I., Farré, M., Fasold, M., Fleming, D., Flicek, P., Fowler, K. E., Frésard, L., Froman, D. P., Garceau, V., Gardner, P. P., Gheyas, A. A., Griffin, D. K., Groenen, M. A. M., Haaf, T., Hanotte, O., Hart, A., Häsler, J., Hedges, S. B., Hertel, J., Howe, K., Hubbard, A., Hume, D. A., Kaiser, P., Kedra, D., Kemp, S. J., Klopp, C., Kniel, K. E., Kuo, R., Lagarrigue, S., Lamont, S. J., Larkin, D. M., Lawal, R. A., Markland, S. M., McCarthy, F. M., McCormack, H. A., McPherson, M. C., Motegi, A., Muljo, S. A., Münsterberg, A., Nag, R., Nanda, I., Neuberger, M., Nitsche, A., Notredame, C., Noyes, H., O'Connor, R., O'Hare, E. A., Oler, A. J., Ommeh, S. C., Pais, H., Persia, M., Pitel, F., Preeyanon, L., Prieto Barja, P., Pritchett, E. M., Rhoads, D. D., Robinson, C. M., Romanov, M. N., Rothschild, M., Roux, P. F., Schmidt, C. J., Schneider, A. S., Schwartz, M. G., Searle, S. M., Skinner, M. A., Smith, C. A., Stadler, P. F., Steeves, T. E., Steinlein, C., Sun, L., Takata, M., Ulitsky, I., Wang, Q., Wang, Y., Warren, W. C., Wood, J. M. D., Wragg, D. & Zhou, H., Aug 20 2015, In : Cytogenetic and Genome Research. 145, 2, p. 78-179 102 p.

Research output: Contribution to journalArticle

2014
23 Citations (Scopus)

Genome sequence of the oleaginous yeast Rhodotorula glutinis ATCC 204091

Paul, D., Magbanua, Z., Arick, M., French, T., Bridges, S. M., Burgess, S. C. & Lawrence, M. L., 2014, In : Genome Announcements. 2, 1, e00046-14.

Research output: Contribution to journalArticle

Rhodotorula
Carbon
Yeasts
Genome
Carotenoids
14 Citations (Scopus)

Proteogenomic mapping of Mycoplasma hyopneumoniae virulent strain 232

Pendarvis, K., Padula, M. P., Tacchi, J. L., Petersen, A. C., Djordjevic, S. P., Burgess, S. C. & Minion, F. C., Jul 8 2014, In : BMC Genomics. 15, 1, 576.

Research output: Contribution to journalArticle

Mycoplasma hyopneumoniae
Genes
Swine Diseases
Genome
Proteins
138 Citations (Scopus)

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

Green, R. E., Braun, E. L., Armstrong, J., Earl, D., Nguyen, N., Hickey, G., Vandewege, M. W., St John, J. A., Capella-Gutiérrez, S., Castoe, T. A., Kern, C., Fujita, M. K., Opazo, J. C., Jurka, J., Kojima, K. K., Caballero, J., Hubley, R. M., Smit, A. F., Platt, R. N., Lavoie, C. A. & 35 others, Ramakodi, M. P., Finger, J. W., Suh, A., Isberg, S. R., Miles, L., Chong, A. Y., Jaratlerdsiri, W., Gongora, J., Moran, C., Iriarte, A., McCormack, J., Burgess, S. C., Edwards, S. V., Lyons, E. H., Williams, C., Breen, M., Howard, J. T., Gresham, C. R., Peterson, D. G., Schmitz, J., Pollock, D. D., Haussler, D., Triplett, E. W., Zhang, G., Irie, N., Jarvis, E. D., Brochu, C. A., Schmidt, C. J., McCarthy, F. M., Faircloth, B. C., Hoffmann, F. G., Glenn, T. C., Gabaldón, T., Paten, B. & Ray, D. A., Dec 12 2014, In : Science. 346, 6215, p. 1254449 1 p.

Research output: Contribution to journalArticle

Birds
Alligators and Crocodiles
Genome
Dinosaurs
Synteny
2013
8 Citations (Scopus)

Ultrasonic Incisions Produce Less Inflammatory Mediator Response during Early Healing than Electrosurgical Incisions

Nanduri, B., Pendarvis, K., Shack, L. A., Kumar, R., Clymer, J. W., Korvick, D. L. & Burgess, S. C., Sep 18 2013, In : PLoS One. 8, 9, e73032.

Research output: Contribution to journalArticle

Electrosurgery
Ultrasonics
ultrasonics
inflammation
Tissue
2012
13 Citations (Scopus)

Nuclear Factor kappa B is central to Marek's Disease herpesvirus induced neoplastic transformation of CD30 expressing lymphocytes in-vivo

Kumar, S., Kunec, D., Buza, J. J., Chiang, H. I., Zhou, H., Subramaniam, S., Pendarvis, K., Cheng, H. H. & Burgess, S. C., Sep 14 2012, In : BMC Systems Biology. 6, 123.

Research output: Contribution to journalArticle

Marek Disease
Lymphocytes
NF-kappa B
Herpesviridae
Lymphoma
18 Citations (Scopus)

RNA-Seq based transcriptional map of bovine respiratory disease pathogen "Histophilus somni 2336"

Kumar, R., Lawrence, M. L., Watt, J., Cooksey, A. M., Burgess, S. C. & Nanduri, B., Jan 20 2012, In : PLoS One. 7, 1, e29435.

Research output: Contribution to journalArticle

Pasteurellaceae
Cattle Diseases
bovine respiratory disease
Pulmonary diseases
Pathogens