Research Output 1982 2019

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Chapter
2018
1 Citation (Scopus)

Laser-capture microdissection of maize kernel compartments for RNA-seq-based expression analysis

Zhang, S., Thakare, D. & Yadegari, R., 2018, Methods in Molecular Biology. Humana Press Inc., Vol. 1676. p. 153-163 11 p. (Methods in Molecular Biology; vol. 1676).

Research output: Chapter in Book/Report/Conference proceedingChapter

Laser Capture Microdissection
Zea mays
Endosperm
RNA
Cell Separation
1 Citation (Scopus)

Nuclear cytometry: Analysis of the patterns of DNA synthesis and transcription using flow cytometry, confocal microscopy, and RNA sequencing

Galbraith, D. W., Sliwinska, E. & Samadder, P., 2018, Methods in Molecular Biology. Humana Press Inc., Vol. 1678. p. 371-392 22 p. (Methods in Molecular Biology; vol. 1678).

Research output: Chapter in Book/Report/Conference proceedingChapter

RNA Sequence Analysis
Confocal Microscopy
Suspensions
Flow Cytometry
DNA

Quantifying re-association of a facultative endohyphal bacterium with a filamentous fungus

Baltrus, D. A., Spraker, J. & Arnold, A. E., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 1-11 11 p. (Methods in Molecular Biology; vol. 1848).

Research output: Chapter in Book/Report/Conference proceedingChapter

Fungi
Bacteria
Gentamicins
Mycelium
Coculture Techniques
2017
1 Citation (Scopus)

Endosperm development and cell specialization

Zhan, J., Dannenhoffer, J. M. & Yadegari, R., Jan 1 2017, Maize Kernel Development. CABI International, p. 28-43 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Endosperm
endosperm
cells
1 Citation (Scopus)

Identification and evolutionary characterization of ARGONAUTE-binding platforms

Trujillo, J. T. & Harris, R. A. M., 2017, Methods in Molecular Biology. Humana Press Inc., Vol. 1640. p. 257-266 10 p. (Methods in Molecular Biology; vol. 1640).

Research output: Chapter in Book/Report/Conference proceedingChapter

Tandem Repeat Sequences
RNA Interference
Proteins
Peptides
2016
7 Citations (Scopus)

Does supplemental lighting make sense for my crop?-empirical evaluations

Kubota, C., Kroggel, M. A., Both, A. J., Burr, J. F. & Whalen, M., May 22 2016, 8th International Symposium on Light in Horticulture. International Society for Horticultural Science, Vol. 1134. p. 403-411 9 p. (Acta Horticulturae; vol. 1134).

Research output: Chapter in Book/Report/Conference proceedingChapter

lighting
photosynthetically active radiation
lettuce
crops
tomatoes
2 Citations (Scopus)

End-of-day far-red lighting combined with blue-rich light environment to mitigate intumescence injury of two interspecific tomato rootstocks

Eguchi, T., Hernández, R. & Kubota, C., May 22 2016, 8th International Symposium on Light in Horticulture. International Society for Horticultural Science, Vol. 1134. p. 163-170 8 p. (Acta Horticulturae; vol. 1134).

Research output: Chapter in Book/Report/Conference proceedingChapter

rootstocks
lighting
tomatoes
leaf abscission
photoperiod
3 Citations (Scopus)

Growth and morphology of vegetable seedlings under different blue and red photon flux ratios using lightemitting diodes as sole-source lighting

Hernández, R., Eguchi, T. & Kubota, C., May 22 2016, 8th International Symposium on Light in Horticulture. International Society for Horticultural Science, Vol. 1134. p. 195-200 6 p. (Acta Horticulturae; vol. 1134).

Research output: Chapter in Book/Report/Conference proceedingChapter

lighting
vegetables
seedlings
hypocotyls
leaf area
2015

100 years of breeding guayule

Coffelt, T. A., Ray, D. T. & Dierig, D. A., Jan 1 2015, Industrial Crops: Breeding for Bioenergy and Bioproducts. Springer New York, p. 351-367 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

guayule
Rubber
Breeding
rubber
breeding
3 Citations (Scopus)

Greenhouse environment control technologies for improving the sustainability of food production

Kozai, T., Kubota, C., Takagaki, M. & Maruo, T., Dec 23 2015, XXIX International Horticultural Congress on Horticulture: Sustaining Lives, Livelihoods and Landscapes (IHC2014): International Symposium on Innovation and New Technologies in Protected Cropping. International Society for Horticultural Science, Vol. 1107. p. 1-13 13 p. (Acta Horticulturae; vol. 1107).

Research output: Chapter in Book/Report/Conference proceedingChapter

controllers
food production
greenhouses
protected cultivation
suburban areas
2 Citations (Scopus)

Growth, Development, Transpiration and Translocation as Affected by Abiotic Environmental Factors

Kubota, C., Oct 26 2015, Plant Factory: An Indoor Vertical Farming System for Efficient Quality Food Production. Elsevier Inc., p. 151-164 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Transpiration
Plant Development
Growth and Development
plant development
transpiration
26 Citations (Scopus)

Light-Emitting Diodes in Horticulture

Mitchell, C. A., Dzakovich, M. P., Gomez, C., Lopez, R., Burr, J. F., Hernández, R., Kubota, C., Currey, C. J., Meng, Q., Runkle, E. S., Bourget, C. M., Morrow, R. C. & Both, A. J., Oct 2 2015, Horticultural Reviews. wiley, Vol. 43. p. 1-88 88 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

horticulture
Light
Lighting
lighting
Photons

Selection of the best black mondo (ophiopogon planiscapus 'nigrescens') clone in tißue culture conditions for micropropagation

Ari, E., Adelberg, J., Delgado, M. & Kroggel, M. A., Jun 28 2015, Acta Horticulturae. International Society for Horticultural Science, Vol. 1087. p. 423-428 6 p. (Acta Horticulturae; vol. 1087).

Research output: Chapter in Book/Report/Conference proceedingChapter

Ophiopogon planiscapus
micropropagation
rooting
clones
selection methods
4 Citations (Scopus)

Towards using biotechnology to modify soybean seeds as protein bioreactors

Herman, E. M. & Schmidt, M., Jan 1 2015, Recent Advancements in Gene Expression and Enabling Technologies in Crop Plants. Springer New York, p. 193-212 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Bioreactors
Biotechnology
bioreactors
Soybeans
biotechnology
2014
4 Citations (Scopus)

A cell-free expression platform for production of protein microarrays

Zárate, X. & Galbraith, D. W., 2014, Methods in Molecular Biology. Humana Press Inc., Vol. 1118. p. 297-307 11 p. (Methods in Molecular Biology; vol. 1118).

Research output: Chapter in Book/Report/Conference proceedingChapter

Protein Array Analysis
Proteins
Immobilized Antibodies
Printing
Cell-Free System
7 Citations (Scopus)

Ecological genomics of pseudomonas syringae

Baltrus, D. A., Hendry, T. A. & Hockett, K. L., Apr 1 2014, Genomics of Plant-Associated Bacteria. Springer-Verlag Berlin Heidelberg, p. 59-77 19 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pseudomonas syringae
Genomics
Plant Diseases
Genetic Research
Bacteriophages
4 Citations (Scopus)

Flow cytometry and sorting in arabidopsis

Galbraith, D. W., 2014, Methods in Molecular Biology. Humana Press Inc., Vol. 1062. p. 509-537 29 p. (Methods in Molecular Biology; vol. 1062).

Research output: Chapter in Book/Report/Conference proceedingChapter

Arabidopsis
Flow Cytometry
Protoplasts
Gene Expression Profiling
Cell Communication
6 Citations (Scopus)

LEDs supplemental lighting for vegetable transplant production: Spectral evaluation and comparisons with HID technology

Hernández, R. & Kubota, C., 2014, Acta Horticulturae. International Society for Horticultural Science, Vol. 1037. p. 829-836 8 p. (Acta Horticulturae; vol. 1037).

Research output: Chapter in Book/Report/Conference proceedingChapter

transplant production
lighting
vegetables
red light
cucumbers
1 Citation (Scopus)

Pulsing effects of supplemental LED lighting on cucumber seedlings growth and morphology in greenhouse

Hernández, R., Dragotakes, A. & Kubota, C., 2014, Acta Horticulturae. International Society for Horticultural Science, Vol. 1037. p. 875-880 6 p. (Acta Horticulturae; vol. 1037).

Research output: Chapter in Book/Report/Conference proceedingChapter

cucumbers
seedling growth
lighting
greenhouses
red light

Syntenic sequence conservation between and within papaya genes

Lyons, E. H. & Tang, H., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 205-224 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Carica
Synteny
papayas
Genes
genes
2013
7 Citations (Scopus)

Grain quality

Yu, Y., Wing, R. A. & Li, J., Jan 1 2013, Genetics and Genomics of Rice. Springer New York, p. 237-254 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

grain quality

Managing production risks in the nursery©

Schuch, U. K. & Teegerstrom, T., Dec 10 2013, Acta Horticulturae. Vol. 1014. p. 135-140 6 p. (Acta Horticulturae; vol. 1014).

Research output: Chapter in Book/Report/Conference proceedingChapter

labor
insurance
marketing
income
weather
3 Citations (Scopus)

Perspective rice 2020 revised: An urgent call to mobilize and coordinate rice functional genomics research worldwide

Wing, R. A. & Zhang, Q., Jan 1 2013, Genetics and Genomics of Rice. Springer New York, p. 387-390 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genomics
genomics
rice
Research
Oryza

Phi (ϕ)X174, Genetics of

Fane, B. A., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc., p. 304-307 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genes
Genome
genome
Reading Frames
single-stranded DNA
31 Citations (Scopus)

The wild relative of Rice: Genomes and genomics

Sanchez, P. L., Wing, R. A. & Brar, D. S., Jan 1 2013, Genetics and Genomics of Rice. Springer New York, p. 9-25 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

wild relatives
Genomics
Genome
genomics
rice
2012
36 Citations (Scopus)

Building the machines: Scaffolding protein functions during bacteriophage morphogenesis

Prevelige, P. E. & Fane, B. A., 2012, Advances in Experimental Medicine and Biology. Vol. 726. p. 325-350 26 p. (Advances in Experimental Medicine and Biology; vol. 726).

Research output: Chapter in Book/Report/Conference proceedingChapter

Bacteriophages
Morphogenesis
Capsid Proteins
Viruses
Proteins
5 Citations (Scopus)

High-throughput monitoring of plant nuclear DNA contents via flow cytometry

Galbraith, D. W. & Lambert, G. M., 2012, Methods in Molecular Biology. Humana Press Inc., Vol. 918. p. 311-325 15 p. (Methods in Molecular Biology; vol. 918).

Research output: Chapter in Book/Report/Conference proceedingChapter

Plant DNA
Genome Size
Flow Cytometry
Plant Genome
Angiosperms
27 Citations (Scopus)

Tomato seedling growth and morphological responses to supplemental LED lighting red: Blue ratios under varied daily solar light integrals

Hernández, R. & Kubota, C., Oct 14 2012, Acta Horticulturae. Vol. 956. p. 187-194 8 p. (Acta Horticulturae; vol. 956).

Research output: Chapter in Book/Report/Conference proceedingChapter

seedling growth
lighting
tomatoes
greenhouses
seedlings
2010

Growth and water use of garden roses in two climates in the Southwestern United States

Schuch, U. K. & Pemberton, H. B., Jul 31 2010, Acta Horticulturae. Vol. 870. p. 39-46 8 p. (Acta Horticulturae; vol. 870).

Research output: Chapter in Book/Report/Conference proceedingChapter

Southwestern United States
gardens
Rosa
climate
shoots
13 Citations (Scopus)

Guayule: Culture, breeding and rubber production

Ray, D. T., Foster, M. A., Coffelt, T. A. & McMahan, C., Sep 1 2010, Industrial Crops and Uses. CABI Publishing, p. 384-410 27 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

guayule
Rubber
rubber
Breeding
breeding
60 Citations (Scopus)

Phylogenetic biology of the Bemisia tabaci sibling species group

Brown, J. K., 2010, Bemisia: Bionomics and Management of a Global Pest. Springer Netherlands, p. 31-67 37 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Hemiptera
sibling species
Bemisia tabaci
Aleyrodidae
Biological Sciences

Prospects for the application of genomics

Brown, J. K., 2010, Bemisia: Bionomics and Management of a Global Pest. Springer Netherlands, p. 499-502 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Hemiptera
Genomics
Aleyrodidae
genomics
biotypes
39 Citations (Scopus)

Systematics of Bemisia and Bemisia Relatives: Can Molecular Techniques Solve the Bemisia tabaci Complex Conundrum-A Taxonomist's Viewpoint

Gill, R. J. & Brown, J. K., 2010, Bemisia: Bionomics and Management of a Global Pest. Springer Netherlands, p. 5-29 25 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Bemisia
Hemiptera
Bemisia tabaci
Aleyrodidae
deserts
2 Citations (Scopus)

Taxonomy, molecular systematics, and gene flow in the Bemisia tabaci complex and Bemisia relatives

Brown, J. K., 2010, Bemisia: Bionomics and Management of a Global Pest. Springer Netherlands, p. 1-4 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Bemisia
Gene Flow
molecular systematics
Bemisia tabaci
gene flow
7 Citations (Scopus)

The whitefly genome-White paper: A proposal to sequence multiple genomes of Bemisia tabaci

Czosnek, H. & Brown, J. K., 2010, Bemisia: Bionomics and Management of a Global Pest. Springer Netherlands, p. 503-532 30 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Hemiptera
Bemisia tabaci
Aleyrodidae
herbaceous plants
Genome
8 Citations (Scopus)

Tools and recent progress in studying gene flow and population genetics of the Bemisia tabaci sibling species group

Hadjistylli, M., Brown, J. K. & Roderick, G. K., 2010, Bemisia: Bionomics and Management of a Global Pest. Springer Netherlands, p. 69-103 35 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Gene Flow
sibling species
Bemisia tabaci
Population Genetics
Birds
2009

The wonderland of global expression profiling

Galbraith, D. W., 2009, Biotechnology in Agriculture and Forestry. Springer International Publishing, Vol. 63. p. 251-266 16 p. (Biotechnology in Agriculture and Forestry; vol. 63).

Research output: Chapter in Book/Report/Conference proceedingChapter

gene
Genes
RNA
genes
transcription (genetics)
2008
44 Citations (Scopus)

Etiology and management of aflatoxin contamination

Cotty, P. J., Probst, C. & Jaime, R. ., May 29 2008, Mycotoxins: Detection Methods, Management, Public Health and Agricultural Trade. CABI Publishing, p. 287-299 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Aflatoxins
etiology
aflatoxins
nontoxigenic strains
crop

Icosahedral ssDNA Bacterial Viruses

Fane, B. A., Chen, M., Cherwa, J. E. & Uchiyama, A., Jan 1 2008, Encyclopedia of Virology. Elsevier Ltd., p. 13-20 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Microvirus
Viruses
Microviridae
Bacteriophages
Parasites

The rice blast story: From genome sequence to function

Dean, R. A., Mitchell, T., Kulkarni, R., Donofrio, N., Powell, A., Oh, Y. Y., Diener, S., Pan, H., Brown, D., Deng, J., Carbone, I., Ebbole, D. J., Thon, M., Farman, M. L., Orbach, M. J., Soderlund, C., Xu, J. R., Lee, Y. H., Talbot, N. J., Coughlan, S. & 2 others, Galagan, J. E. & Birren, B. W., Jan 1 2008, Exploitation of Fungi: Symposium of the British Mycological Society Held at the University of Manchester September 2005. Cambridge University Press, p. 10-22 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genome
Magnaporthe
Fungi
Spores
Plant Roots
2007
3 Citations (Scopus)

Analysis of Plant Gene Expression Using Flow Cytometry and Sorting

Galbraith, D. W., May 21 2007, Flow Cytometry with Plant Cells: Analysis of Genes, Chromosomes and Genomes. Wiley-VCH Verlag GmbH & Co. KGaA, p. 405-422 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Plant Genes
sorting
flow cytometry
Flow Cytometry
Technology
10 Citations (Scopus)

Protoplast Analysis using Flow Cytometry and Sorting

Galbraith, D. W., May 21 2007, Flow Cytometry with Plant Cells: Analysis of Genes, Chromosomes and Genomes. Wiley-VCH Verlag GmbH & Co. KGaA, p. 231-250 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Protoplasts
sorting
protoplasts
flow cytometry
cell cycle
4 Citations (Scopus)

Rice genome sequence: The foundation for understanding the genetic systems

Matsumoto, T., Wing, R. A., Han, B. & Sasaki, T., 2007, Rice Functional Genomics: Challenges, Progress and Prospects. Springer New York, p. 5-20 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genes
36 Citations (Scopus)

The bemisia tabaci complex: Genetic and phenotypic variation and relevance to TYLCV-vector interactions

Brown, J. K., 2007, Tomato Yellow Leaf Curl Virus Disease: Management, Molecular Biology, Breeding for Resistance. Springer Netherlands, p. 25-56 32 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Lycopersicon esculentum
Hemiptera
Viruses
Plant Viruses
Begomovirus
9 Citations (Scopus)

The influence of seed source, Habitat and fungi on cecropia seed survival in two neotropical forests

Gallery, R. E., Dalling, J. W., Wolfe, B. T. & Arnold, A. E., Aug 30 2007, Seed Dispersal: Theory and its Application in a Changing World. CABI Publishing, p. 479-498 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Cecropia
tropical forests
Ecosystem
Seeds
Fungi
8 Citations (Scopus)

The oryza map alignment project (OMAP): A new resource for comparative genome studies within oryza

Wing, R. A., Kim, H., Goicoechea, J. L., Yu, Y., Kudrna, D. A., Zuccolo, A., Ammiraju, J. S. S., Luo, M., Nelson, W., Ma, J., Sanmiguel, P., Hurwitz, B. L., Ware, D., Brar, D., Mackill, D., Soderlund, C., Stein, L. & Jackson, S., 2007, Rice Functional Genomics: Challenges, Progress and Prospects. Springer New York, p. 395-409 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Oryza
Genes
Genome
genome
rice
2006
1 Citation (Scopus)

Mechanisms underlying plant tolerance to abiotic stresses

Ohta, M., Schumaker, K. S. & Zhu, J. K., 2006, Multigenic and Induced Systemic Resistance in Plants. Springer US, p. 360-385 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Droughts
Salinity
abiotic stress
crop yield
drought
2005
15 Citations (Scopus)

Concepts, definitions, ventilation methods, advantages and disadvantages

Kozai, T. & Kubota, C., 2005, Photoautotrophic (sugar-free medium) Micropropagation as a New Micropropagation and Transplant Production System. Springer Netherlands, p. 19-30 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Air Movements
natural ventilation
Ventilation
ethylene
relative humidity

Frequently asked questions

Kubota, C. & Kozai, T., 2005, Photoautotrophic (sugar-free medium) Micropropagation as a New Micropropagation and Transplant Production System. Springer Netherlands, p. 237-242 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Citations (Scopus)

In vitro aerial environments and their effects on growth and development of plants

Kozai, T. & Kubota, C., 2005, Photoautotrophic (sugar-free medium) Micropropagation as a New Micropropagation and Transplant Production System. Springer Netherlands, p. 31-52 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Growth and Development
growth and development
micropropagation
Controlled Environment
transplant production