Research Output 1977 2018

  • 9815 Citations
  • 47 h-Index
  • 132 Article
  • 11 Chapter
  • 4 Conference contribution
2018

Nuclear cytometry: Analysis of the patterns of DNA synthesis and transcription using flow cytometry, confocal microscopy, and RNA sequencing

Galbraith, D. W., Sliwinska, E. & Samadder, P. 2018 Methods in Molecular Biology. Humana Press Inc., Vol. 1678, p. 371-392 22 p. (Methods in Molecular Biology; vol. 1678)

Research output: ResearchChapter

RNA Sequence Analysis
Confocal Microscopy
Suspensions
Flow Cytometry
DNA
2016
2 Citations

Expression and purification of recombinant proteins in Escherichia coli tagged with the metal-binding protein CusF

Cantu-Bustos, J. E., Vargas-Cortez, T., Morones-Ramirez, J. R., Balderas-Renteria, I., Galbraith, D. W., McEvoy, M. M. & Zarate, X. May 1 2016 In : Protein Expression and Purification. 121, p. 61-65 5 p.

Research output: Research - peer-reviewArticle

Recombinant Proteins
Carrier Proteins
Metals
Escherichia coli
Proteins
1 Citations

Flow cytometry and single nucleus sorting for Cre-based analysis of changes in transcriptional states

Samadder, P., Weng, N., Doetschman, T., Heimark, R. L. & Galbraith, D. W. May 1 2016 In : Cytometry Part A. 89, 5, p. 430-442 13 p.

Research output: Research - peer-reviewArticle

Flow Cytometry
Green Fluorescent Proteins
Carcinogenesis
Histones
Transgenic Mice

How the novel biostimulant CYT14 influences nutrient uptake of common foliar nutritional supplements as evidenced by genomics and ICP analysis

Canady, M., Clark, C., Smith, R., Larsen, C., Gutierrez, A., Janda, J., Galbraith, D. W., Blaszczak, A. G. & Wozniak, E. M. Nov 18 2016 2nd World Congress on the Use of Biostimulants in Agriculture. International Society for Horticultural Science, Vol. 1148, p. 69-76 8 p. (Acta Horticulturae; vol. 1148)

Research output: ResearchConference contribution

nutrient uptake
dietary supplements
genomics
nutrients
tissues
1 Citations

Molecular mechanism of action for the novel biostimulant CYT31 in plants exposed to drought stress

Blaszczak, A. G., Smith, R., Gutierrez, A., Galbraith, D. W., Janda, J., Vanier, C. & Wozniak, E. M. Nov 18 2016 2nd World Congress on the Use of Biostimulants in Agriculture. International Society for Horticultural Science, Vol. 1148, p. 85-92 8 p. (Acta Horticulturae; vol. 1148)

Research output: ResearchConference contribution

mechanism of action
water stress
tissues
reactive oxygen species
drought
2015
4 Citations

Redrawing the frontiers in the age of post-publication review

Galbraith, D. W. 2015 In : Frontiers in Genetics. 6, JUN, 198

Research output: Research - peer-reviewArticle

Publications
Peer Review
Quality Control
Literature
Fraud
2014
2 Citations

A cell-free expression platform for production of protein microarrays

Zárate, X. & Galbraith, D. W. 2014 Methods in Molecular Biology. Vol. 1118, p. 297-307 11 p. (Methods in Molecular Biology; vol. 1118)

Research output: ResearchChapter

Protein Array Analysis
Proteins
Immobilized Antibodies
Printing
Cell-Free System
2 Citations

A cell-free expression platform for production of protein microarrays

Zárate, X. & Galbraith, D. W. 2014 Methods in Molecular Biology. Humana Press Inc., Vol. 1118, p. 297-307 11 p. (Methods in Molecular Biology; vol. 1118)

Research output: ResearchChapter

Protein Array Analysis
Proteins
Immobilized Antibodies
Printing
Cell-Free System
1 Citations

Challenges and solutions in cytometric measurements of non-mammalian species

Galbraith, D. W. Oct 1 2014 In : Cytometry Part A. 85, 10, p. 831-832 2 p.

Research output: Research - peer-reviewArticle

Endoreduplicative standards for calibration of flow cytometric C-Value measurements

Galbraith, D. W. 2014 In : Cytometry Part A. 85, 4, p. 368-374 7 p.

Research output: Research - peer-reviewArticle

Calibration
DNA
Genome Size
Flow Cytometry
Endoreduplication
1 Citations

Flow cytometry and sorting in arabidopsis

Galbraith, D. W. 2014 Methods in Molecular Biology. Humana Press Inc., Vol. 1062, p. 509-537 29 p. (Methods in Molecular Biology; vol. 1062)

Research output: ResearchChapter

Arabidopsis
Flow Cytometry
Protoplasts
Gene Expression Profiling
Cell Communication

Flow cytometry and sorting in arabidopsis

Galbraith, D. W. 2014 Methods in Molecular Biology. Vol. 1062, p. 509-537 29 p.

Research output: ResearchChapter

Arabidopsis
Flow Cytometry
Protoplasts
Gene Expression Profiling
Cell Communication
12 Citations

Genome size variation in the Fagaceae and its implications for trees

Chen, S. C., Cannon, C. H., Kua, C. S., Liu, J. J. & Galbraith, D. W. 2014 In : Tree Genetics and Genomes. 10, 4, p. 977-988 12 p.

Research output: Research - peer-reviewArticle

Fagaceae
Genome Size
genome
Genome
family
2 Citations

TOPOISOMERASE 6B is involved in chromatin remodelling associated with control of carbon partitioning into secondary metabolites and cell walls, and epidermal morphogenesis in Arabidopsis

Mittal, A., Balasubramanian, R., Cao, J., Singh, P., Subramanian, S., Hicks, G., Nothnagel, E. A., Abidi, N., Janda, J., Galbraith, D. W. & Rock, C. D. 2014 In : Journal of Experimental Botany. 65, 15, p. 4217-4239 23 p.

Research output: Research - peer-reviewArticle

Chromatin Assembly and Disassembly
Morphogenesis
Arabidopsis
Cell Wall
Carbon
2013
3 Citations

Identification and characterization of a repertoire of genes differentially expressed in developing top ear shoots between a superior hybrid and its parental inbreds in Zea mays L.

Qin, J., Scheuring, C. F., Wei, G., Zhi, H., Zhang, M., Huang, J. J., Zhou, X., Galbraith, D. W. & Zhang, H. B. Dec 2013 In : Molecular Genetics and Genomics. 288, 12, p. 691-705 15 p.

Research output: Research - peer-reviewArticle

Zea mays
Ear
Genes
Hybrid Vigor
Dicarboxylic Acids
40 Citations

RNA-sequencing from single nuclei

Grindberg, R. V., Yee-Greenbaum, J. L., McConnell, M. J., Novotny, M., O'Shaughnessy, A. L., Lambert, G. M., Araúzo-Bravo, M. J., Lee, J., Fishman, M., Robbins, G. E., Lin, X., Venepally, P., Badger, J. H., Galbraith, D. W., Gage, F. H. & Lasken, R. S. Dec 3 2013 In : Proceedings of the National Academy of Sciences of the United States of America. 110, 49, p. 19802-19807 6 p.

Research output: Research - peer-reviewArticle

RNA Sequence Analysis
Cell Nucleus
Gene Expression
Messenger RNA
Genes
2012
47 Citations

Enhanced salt stress tolerance of rice plants expressing a vacuolar H +-ATPase subunit c1 (SaVHAc1) gene from the halophyte grass Spartina alterniflora Löisel

Baisakh, N., Ramanarao, M. V., Rajasekaran, K., Subudhi, P., Janda, J., Galbraith, D., Vanier, C. & Pereira, A. May 2012 In : Plant Biotechnology Journal. 10, 4, p. 453-464 12 p.

Research output: Research - peer-reviewArticle

Spartina alterniflora
stress tolerance
adenosinetriphosphatase
salt stress
grasses
4 Citations

Flow cytometry and cell sorting: The next generation

Galbraith, D. Jul 2012 In : Methods. 57, 3, p. 249-250 2 p.

Research output: Research - peer-reviewArticle

High-throughput monitoring of plant nuclear DNA contents via flow cytometry

Galbraith, D. W. & Lambert, G. M. 2012 Methods in Molecular Biology. Humana Press Inc., Vol. 918, p. 311-325 15 p. (Methods in Molecular Biology; vol. 918)

Research output: ResearchChapter

Plant DNA
Genome Size
Flow Cytometry
Plant Genome
Angiosperms
3 Citations

High-throughput monitoring of plant nuclear DNA contents via flow cytometry.

Galbraith, D. W. & Lambert, G. M. 2012 In : Methods in molecular biology (Clifton, N.J.). 918, p. 311-325 15 p.

Research output: Research - peer-reviewArticle

Plant DNA
Genome Size
Flow Cytometry
Plant Genome
Angiosperms
2 Citations

RNA interference-mediated gene knockdown within specific cell types

Zhang, C. & Galbraith, D. W. Sep 2012 In : Plant Molecular Biology. 80, 2, p. 169-176 8 p.

Research output: Research - peer-reviewArticle

RNA interference
genes
cells
Gene Knockdown Techniques
RNA Interference
138 Citations

The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads

Wang, Z. , Hobson, N. , Galindo, L. , Zhu, S. , Shi, D. , McDill, J. , Yang, L. , Hawkins, S. , Neutelings, G. , Datla, R. , Lambert, G. , Galbraith, D. W. , Grassa, C. J. , Geraldes, A. , Cronk, Q. C. , Cullis, C. , Dash, P. K. , Kumar, P. A. , Cloutier, S. , Sharpe, A. G. & 3 others Wong, G. K. S., Wang, J. & Deyholos, M. K. Nov 2012 In : Plant Journal. 72, 3, p. 461-473 13 p.

Research output: Research - peer-reviewArticle

Linum usitatissimum
flax
genome
Flax
Firearms
2011
9 Citations

A high-density quantitative nuclease protection microarray platform for high throughput analysis of gene expression

Bourzac, K. M., Rounseville, M. P., Zarate, X., Maddula, V. S. R. K., Henderson, D. C., Luckey, J. A., Seligmann, B. & Galbraith, D. W. Jun 10 2011 In : Journal of Biotechnology. 154, 1, p. 68-75 8 p.

Research output: Research - peer-reviewArticle

Nuclease Protection Assays
Gene Expression
Oligonucleotide Array Sequence Analysis
Equipment and Supplies
Fluorescence
11 Citations

Barcodes for DNA sequencing with guaranteed error correction capability

Krishnan, A. R., Sweeney, M., Vasic, J., Galbraith, D. W. & Vasic, B. Feb 17 2011 In : Electronics Letters. 47, 4, p. 236-237 2 p.

Research output: Research - peer-reviewArticle

Error correction
DNA
Multiplexing
Throughput
18 Citations

Dissecting quantitative resistance against blast disease using heterogeneous inbred family lines in rice

Liu, Y., Zhang, G., Bernardo, M., Leung, H., Zhu, X. Y., Zhang, S., Liu, B., Edwards, J., Galbraith, D. W. & Leach, J. Feb 2011 In : Theoretical And Applied Genetics. 122, 2, p. 341-353 13 p.

Research output: Research - peer-reviewArticle

blast disease
quantitative trait loci
rice
Genes
Oryza
1 Citations
13 Citations
Protoplasts
Mammals
Flow Cytometry
Genome Size
Angiosperms
3 Citations
Transcription
Microarrays
Ionization
Mass spectrometry
Desorption
2010
8 Citations

Applications of microarrays for crop improvement: Here, there, and everywhere

Galbraith, D. W. & Edwards, J. May 2010 In : BioScience. 60, 5, p. 337-348 12 p.

Research output: Research - peer-reviewArticle

organisms
crops
Technology
agriculture
Agriculture
10 Citations

Development of high-yield autofluorescent protein microarrays using hybrid cell-free expression with combined Escherichia coli S30 and wheat germ extracts

Zárate, X., Henderson, D. C., Phillips, K. C., Lake, A. D. & Galbraith, D. W. Jun 15 2010 In : Proteome Science. 8, 32

Research output: Research - peer-reviewArticle

Protein Array Analysis
Hybrid Cells
Triticum
Escherichia coli
Proteins
9 Citations

Functional analysis of the gossypium arboreum genome

Barthelson, R. A., Qaisar, U. & Galbraith, D. W. Jun 2010 In : Plant Molecular Biology Reporter. 28, 2, p. 334-343 10 p.

Research output: Research - peer-reviewArticle

Gossypium arboreum
genome
Gossypium
Genome
Genes
56 Citations

Genome structures and halophyte-specific gene expression of the extremophile thellungiella parvula in comparison with Thellungiella salsuginea (Thellungiella halophila) and arabidopsis

Oh, D. H., Dassanayake, M., Haas, J. S., Kropornika, A., Wright, C., d'Urzo, M. P., Hong, H., Ali, S., Hernandez, A., Lambert, G. M., Inan, G., Galbraith, D. W., Bressan, R. A., Yun, D. J., Zhu, J. K., Cheeseman, J. M. & Bohnert, H. J. Nov 2010 In : Plant Physiology. 154, 3, p. 1040-1052 13 p.

Research output: Research - peer-reviewArticle

Halophila
Arabidopsis
gene expression
genome
extremophiles
2009
43 Citations

Analysis of Photoperiod Sensitivity5 sheds light on the role of phytochromes in photoperiodic flowering in rice

Andrés, F., Galbraith, D. W., Talón, M. & Domingo, C. Oct 2009 In : Plant Physiology. 151, 2, p. 681-690 10 p.

Research output: Research - peer-reviewArticle

phytochrome
heading
photoperiod
flowering
rice
24 Citations

Evidence for antisense transcription associated with microRNA target mRNAs in arabidopsis

Luo, Q. J., Samanta, M. P., Köksal, F., Janda, J., Galbraith, D. W., Richardson, C. R., Ou-Yang, F. & Rock, C. D. Apr 2009 In : PLoS Genetics. 5, 4

Research output: Research - peer-reviewArticle

MicroRNAs
Arabidopsis
Messenger RNA
microRNA
transcription (genetics)
69 Citations

Gene-expression profiling of grape bud response to two alternative dormancy-release stimuli expose possible links between impaired mitochondrial activity, hypoxia, ethylene-ABA interplay and cell enlargement

Ophir, R., Pang, X., Halaly, T., Venkateswari, J., Lavee, S., Galbraith, D. & Or, E. Nov 2009 In : Plant Molecular Biology. 71, 4-5, p. 403-423 21 p.

Research output: Research - peer-reviewArticle

dormancy
abscisic acid
hypoxia
ethylene
grapes
14 Citations

Measuring genome size of desert plants using dry seeds

Sliwinska, E., Pisarczyk, I., Pawlik, A. & Galbraith, D. W. Feb 2009 In : Botany. 87, 2, p. 127-135 9 p.

Research output: Research - peer-reviewArticle

genome
desert
seed
measuring
xerophytes
265 Citations

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis

Mustroph, A., Zanetti, M. E., Jang, C. J. H., Holtan, H. E., Repetti, P. P., Galbraith, D. W., Girke, T. & Bailey-Serres, J. Nov 3 2009 In : Proceedings of the National Academy of Sciences of the United States of America. 106, 44, p. 18843-18848 6 p.

Research output: Research - peer-reviewArticle

Arabidopsis
Messenger RNA
Population
Hypoxia
Ribosomes
60 Citations

RiceArrayNet: A database for correlating gene expression from transcriptome profiling, and its application to the analysis of coexpressed genes in rice

Lee, T. H., Kim, Y. K., Pham, T. T. M., Song, S. I., Kim, J. K., Kang, K. Y., An, G., Jung, K. H., Galbraith, D. W., Kim, M., Yoon, U. H. & Nahm, B. H. Sep 2009 In : Plant Physiology. 151, 1, p. 16-33 18 p.

Research output: Research - peer-reviewArticle

Gene Expression Profiling
Databases
Genes
Oryza
transcriptomics
29 Citations
Plant DNA
Angiosperms
Endoreduplication
Plant Development
Propidium

The wonderland of global expression profiling

Galbraith, D. W. 2009 Biotechnology in Agriculture and Forestry. Springer International Publishing, Vol. 63, p. 251-266 16 p. (Biotechnology in Agriculture and Forestry; vol. 63)

Research output: ResearchChapter

genes
gene
Genes
transcription (genetics)
RNA
70 Citations

Transcript profiling in Vitis riparia during chilling requirement fulfillment reveals coordination of gene expression patterns with optimized bud break

Mathiason, K., He, D., Grimplet, J., Venkateswari, J., Galbraith, D. W., Or, E. & Fennell, A. 2009 In : Functional and Integrative Genomics. 9, 1, p. 81-96 16 p.

Research output: Research - peer-reviewArticle

Vitis
Gene Expression
Genes
Expressed Sequence Tags
Carbohydrate Metabolism
2008
29 Citations

Development and evaluation of a high-throughput, low-cost genotyping platform based on oligonucleotide microarrays in rice

Edwards, J. D., Janda, J., Sweeney, M. T., Gaikwad, A. B., Liu, B., Leung, H. & Galbraith, D. W. 2008 In : Plant Methods. 4, 1, 13

Research output: Research - peer-reviewArticle

oligonucleotides
genotyping
rice
Oligonucleotide Array Sequence Analysis
Costs and Cost Analysis
42 Citations

Diurnal and circadian rhythms in the tomato transcriptome and their modulation by cryptochrome photoreceptors

Facella, P., Lopez, L., Carbone, F., Galbraith, D. W., Giuliano, G. & Perrotta, G. Jul 30 2008 In : PLoS One. 3, 7, e2798

Research output: Research - peer-reviewArticle

photoreceptors
transcriptome
circadian rhythm
tomatoes
cryptochromes
66 Citations

Global characterization of cell-specific gene expression through fluorescence-activated sorting of nuclei

Zhang, C., Barthelson, R. A., Lambert, G. M. & Galbraith, D. W. May 2008 In : Plant Physiology. 147, 1, p. 30-40 11 p.

Research output: Research - peer-reviewArticle

sorting
fluorescence
gene expression
genes
cells
107 Citations

Plant systems biology comes of age

Yuan, J. S., Galbraith, D. W., Dai, S. Y., Griffin, P. & Stewart, C. N. Apr 2008 In : Trends in Plant Science. 13, 4, p. 165-171 7 p.

Research output: Research - peer-reviewArticle

Systems Biology
Biological Sciences
Information Services
Circadian Rhythm
Information Systems
1 Citations

Targeted protein accumulation promoted by autoassembly and its recovery from plant cells

Noizet, M., Harrabi, F., Vijayalakshmi, M., Galbraith, D., Thomas, D. & Thomasset, B. Mar 2008 In : Biotechnology Journal. 3, 3, p. 392-402 11 p.

Research output: Research - peer-reviewArticle

Glucuronidase
Plant Cells
Proteins
Membranes
Enzymes
2007
3 Citations

Analysis of Plant Gene Expression Using Flow Cytometry and Sorting

Galbraith, D. W. May 21 2007 Flow Cytometry with Plant Cells: Analysis of Genes, Chromosomes and Genomes. Wiley-VCH Verlag GmbH & Co. KGaA, p. 405-422 18 p.

Research output: ResearchChapter

33 Citations

Comparison of the contributions of the nuclear and cytoplasmic compartments to global gene expression in human cells

Barthelson, R. A., Lambert, G. M., Vanier, C., Lynch, R. M. & Galbraith, D. W. Sep 25 2007 In : BMC Genomics. 8, 340

Research output: Research - peer-reviewArticle

RNA
Gene Expression
MicroRNAs
Cell Cycle
Cytoplasm
31 Citations

Digital expression profiling of a grape-bud EST collection leads to new insight into molecular events during grape-bud dormancy release

Keilin, T., Pang, X., Venkateswari, J., Halaly, T., Crane, O., Keren, A., Ogrodovitch, A., Ophir, R., Volpin, H., Galbraith, D. & Or, E. Oct 2007 In : Plant Science. 173, 4, p. 446-457 12 p.

Research output: Research - peer-reviewArticle

dormancy
grapes
buds
Expressed Sequence Tags
Vitis
9 Citations

High-throughput, high-sensitivity analysis of gene expression in arabidopsis

Kris, R. M., Felder, S., Deyholos, M., Lambert, G. M., Hinton, J., Botros, I., Martel, R., Seligmann, B. & Galbraith, D. W. Jul 2007 In : Plant Physiology. 144, 3, p. 1256-1266 11 p.

Research output: Research - peer-reviewArticle

Arabidopsis
gene expression
genes
Gene Expression
Genes