John D Kececioglu

  • 1644 Citations
  • 18 h-Index
1989 …2018
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Fingerprint Dive into the research topics where John D Kececioglu is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

Sequence Alignment Medicine & Life Sciences
Multiple Sequence Alignment Mathematics
Alignment Mathematics
Benchmarking Medicine & Life Sciences
Chromosomes Engineering & Materials Science
Proteins Engineering & Materials Science
DNA sequences Engineering & Materials Science
Approximation algorithms Engineering & Materials Science

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Research Output 1989 2018

  • 1644 Citations
  • 18 h-Index
  • 25 Conference contribution
  • 21 Article
  • 1 Chapter

Adaptive Local Realignment of Protein Sequences

Deblasio, D. & Kececioglu, J. D., Jul 1 2018, In : Journal of Computational Biology. 25, 7, p. 780-793 14 p.

Research output: Contribution to journalArticle

Protein Sequence
Mutation Rate
13 Citations (Scopus)

Machine-learning-based Brokers for Real-time Classification of the LSST Alert Stream

Narayan, G., Zaidi, T., Soraisam, M. D., Wang, Z., Lochner, M., Matheson, T., Saha, A., Yang, S., Zhao, Z., Kececioglu, J. D., Scheidegger, C. E., Snodgrass, R. T., Axelrod, T., Jenness, T., Maier, R. S., Ridgway, S. T., Seaman, R. L., Evans, E. M., Singh, N., Taylor, C. & 3 others, Toeniskoetter, J., Welch, E. & Zhu, S., May 1 2018, In : Astrophysical Journal, Supplement Series. 236, 1, 9.

Research output: Contribution to journalArticle

machine learning
temporal analysis
1 Citation (Scopus)

Boosting alignment accuracy by adaptive local realignment

DeBlasio, D. & Kececioglu, J. D., 2017, Research in Computational Molecular Biology - 21st Annual International Conference, RECOMB 2017, Proceedings. Springer Verlag, Vol. 10229 LNCS. p. 1-17 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10229 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution


Core column prediction for protein multiple sequence alignments

DeBlasio, D. & Kececioglu, J. D., Apr 19 2017, In : Algorithms for Molecular Biology. 12, 1, 11.

Research output: Contribution to journalArticle

Multiple Sequence Alignment
Sequence Alignment
4 Citations (Scopus)

EMP: execution time measurement protocol for compute-bound programs

Suh, Y. K., Snodgrass, R. T., Kececioglu, J. D., Downey, P. J., Maier, R. S. & Yi, C., Apr 1 2017, In : Software - Practice and Experience. 47, 4, p. 559-597 39 p.

Research output: Contribution to journalArticle

Time measurement
Network protocols
Computer science