• 34593 Citations
  • 81 h-Index
1985 …2020

Research output per year

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Research Output

2020

A platinum standard pan-genome resource that represents the population structure of Asian rice

Zhou, Y., Chebotarov, D., Kudrna, D., Llaca, V., Lee, S., Rajasekar, S., Mohammed, N., Al-Bader, N., Sobel-Sorenson, C., Parakkal, P., Arbelaez, L. J., Franco, N., Alexandrov, N., Hamilton, N. R. S., Leung, H., Mauleon, R., Lorieux, M., Zuccolo, A., McNally, K., Zhang, J. & 1 others, Wing, R. A., Dec 1 2020, In : Scientific Data. 7, 1, 113.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Evolution and Diversity of the Wild Rice Oryza officinalis Complex, across Continents, Genome Types, and Ploidy Levels

Shenton, M., Kobayashi, M., Terashima, S., Ohyanagi, H., Copetti, D., Hernández-Hernández, T., Zhang, J., Ohmido, N., Fujita, M., Toyoda, A., Ikawa, H., Fujiyama, A., Furuumi, H., Miyabayashi, T., Kubo, T., Kudrna, D., Wing, R., Yano, K., Nonomura, K. I., Sato, Y. & 1 others, Kurata, N., Apr 1 2020, In : Genome biology and evolution. 12, 4, p. 413-428 16 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Evolutionary Dynamics of Abundant 7-bp Satellites in the Genome of Drosophila virilis

Flynn, J. M., Long, M., Wing, R. A., Clark, A. G. & Arkhipova, I., May 1 2020, In : Molecular biology and evolution. 37, 5, p. 1362-1375 14 p.

Research output: Contribution to journalArticle

1 Scopus citations

Mitochondrial plastid DNA can cause DNA barcoding paradox in plants

Park, H. S., Jayakodi, M., Lee, S. H., Jeon, J. H., Lee, H. O., Park, J. Y., Moon, B. C., Kim, C. K., Wing, R. A., Newmaster, S. G., Kim, J. Y. & Yang, T. J., Dec 1 2020, In : Scientific reports. 10, 1, 6112.

Research output: Contribution to journalArticle

Open Access
2019

Functional screening of genes from a halophyte wild rice relative Porteresia coarctata in Arabidopsis model identifies candidate genes involved in salt tolerance

Mangu, V. R., Ratnasekera, D., Yabes, J. C., Wing, R. A. & Baisakh, N., Jan 1 2019, In : Current Plant Biology. 100107.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Genome sequence of the model rice variety KitaakeX

Jain, R., Jenkins, J., Shu, S., Chern, M., Martin, J. A., Copetti, D., Duong, P. Q., Pham, N. T., Kudrna, D. A., Talag, J., Schackwitz, W. S., Lipzen, A. M., Dilworth, D., Bauer, D., Grimwood, J., Nelson, C. R., Xing, F., Xie, W., Barry, K. W., Wing, R. A. & 3 others, Schmutz, J., Li, G. & Ronald, P. C., Nov 27 2019, In : BMC genomics. 20, 1, 905.

Research output: Contribution to journalArticle

2 Scopus citations

Genome-wide association mapping of date palm fruit traits

Hazzouri, K. M., Gros-Balthazard, M., Flowers, J. M., Copetti, D., Lemansour, A., Lebrun, M., Masmoudi, K., Ferrand, S., Dhar, M. I., Fresquez, Z. A., Rosas, U., Zhang, J., Talag, J., Lee, S., Kudrna, D., Powell, R. F., Leitch, I. J., Krueger, R. R., Wing, R. A., Amiri, K. M. A. & 1 others, Purugganan, M. D., Dec 1 2019, In : Nature communications. 10, 1, 4680.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Progress in single-access information systems for wheat and rice crop improvement

Scheben, A., Chan, C. K. K., Mansueto, L., Mauleon, R., Larmande, P., Alexandrov, N., Wing, R. A., McNally, K. L., Quesneville, H. & Edwards, D., Mar 22 2019, In : Briefings in bioinformatics. 20, 2, p. 565-571 7 p.

Research output: Contribution to journalArticle

1 Scopus citations

Rapid evolution of protein diversity by de novo origination in Oryza

Zhang, L., Ren, Y., Yang, T., Li, G., Chen, J., Gschwend, A. R., Yu, Y., Hou, G., Zi, J., Zhou, R., Wen, B., Zhang, J., Chougule, K., Wang, M., Copetti, D., Peng, Z., Zhang, C., Zhang, Y., Ouyang, Y., Wing, R. A. & 2 others, Liu, S. & Long, M., Apr 1 2019, In : Nature Ecology and Evolution. 3, 4, p. 679-690 12 p.

Research output: Contribution to journalArticle

Open Access
17 Scopus citations

Structural variants in 3000 rice genomes

Fuentes, R. R., Chebotarov, D., Duitama, J., Smith, S., De la Hoz, J. F., Mohiyuddin, M., Wing, R. A., McNally, K. L., Tatarinova, T., Grigoriev, A., Mauleon, R. & Alexandrov, N., May 2019, In : Genome Research. 29, 5, p. 870-880 11 p.

Research output: Contribution to journalArticle

Open Access
13 Scopus citations

The Genomics of Oryza Species Provides Insights into Rice Domestication and Heterosis

Chen, E., Huang, X., Tian, Z., Wing, R. A. & Han, B., Apr 1 2019, In : Annual Review of Plant Biology. 70, p. 639-665 27 p.

Research output: Contribution to journalReview article

5 Scopus citations
2018

Comparison of oryza sativa and oryza brachyantha genomes reveals selection-driven gene escape from the centromeric regions

Liao, Y., Zhang, X., Li, B., Liu, T., Chen, J., Bai, Z., Wang, M., Shi, J., Walling, J. G., Wing, R. A., Jiang, J. & Chen, M., Aug 1 2018, In : Plant Cell. 30, 8, p. 1729-1744 16 p.

Research output: Contribution to journalArticle

7 Scopus citations

Erratum to: Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza (Nature Genetics, (2018), 50, 2, (285-296), 10.1038/s41588-018-0040-0)

Stein, J. C., Yu, Y., Copetti, D., Zwickl, D. J., Zhang, L., Zhang, C., Chougule, K., Gao, D., Iwata, A., Goicoechea, J. L., Wei, S., Wang, J., Liao, Y., Wang, M., Jacquemin, J., Becker, C., Kudrna, D., Zhang, J., Londono, C. E. M., Song, X. & 45 others, Lee, S., Sanchez, P., Zuccolo, A., Ammiraju, J. S. S., Talag, J., Danowitz, A., Rivera, L. F., Gschwend, A. R., Noutsos, C., Wu, C. C., Kao, S. M., Zeng, J. W., Wei, F. J., Zhao, Q., Feng, Q., El Baidouri, M., Carpentier, M. C., Lasserre, E., Cooke, R., da Rosa Farias, D., da Maia, L. C., dos Santos, R. S., Nyberg, K. G., McNally, K. L., Mauleon, R., Alexandrov, N., Schmutz, J., Flowers, D., Fan, C., Weigel, D., Jena, K. K., Wicker, T., Chen, M., Han, B., Henry, R., Hsing, Y. I. C., Kurata, N., de Oliveira, A. C., Panaud, O., Jackson, S. A., Machado, C. A., Sanderson, M. J., Long, M., Ware, D. & Wing, R. A., Nov 1 2018, In : Nature Genetics. 50, 11, 1 p.

Research output: Contribution to journalComment/debate

1 Scopus citations

Genetic control of seed shattering during African rice domestication

Lv, S., Wu, W., Wang, M., Meyer, R. S., Ndjiondjop, M. N., Tan, L., Zhou, H., Zhang, J. ., Fu, Y., Cai, H., Sun, C., Wing, R. A. & Zhu, Z., Jun 1 2018, In : Nature Plants. 4, 6, p. 331-337 7 p.

Research output: Contribution to journalArticle

19 Scopus citations

Genome and evolution of the shade-requiring medicinal herb Panax ginseng

Kim, N. H., Jayakodi, M., Lee, S. C., Choi, B. S., Jang, W., Lee, J., Kim, H. H., Waminal, N. E., Lakshmanan, M., van Nguyen, B., Lee, Y. S., Park, H. S., Koo, H. J., Park, J. Y., Perumal, S., Joh, H. J., Lee, H., Kim, J., Kim, I. S., Kim, K. & 24 others, Koduru, L., Kang, K. B., Sung, S. H., Yu, Y., Park, D. S., Choi, D., Seo, E., Kim, S., Kim, Y. C., Hyun, D. Y., Park, Y. I., Kim, C., Lee, T. H., Kim, H. U., Soh, M. S., Lee, Y., In, J. G., Kim, H. S., Kim, Y. M., Yang, D. C., Wing, R. A., Lee, D. Y., Paterson, A. H. & Yang, T. J., Nov 2018, In : Plant Biotechnology Journal. 16, 11, p. 1904-1917 14 p.

Research output: Contribution to journalArticle

18 Scopus citations

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Stein, J. C., Yu, Y., Copetti, D., Zwickl, D. J., Zhang, L., Zhang, C., Chougule, K., Gao, D., Iwata, A., Goicoechea, J. L., Wei, S., Wang, J., Liao, Y., Wang, M., Jacquemin, J., Becker, C., Kudrna, D., Zhang, J., Londono, C. E. M., Song, X. & 45 others, Lee, S., Sanchez, P., Zuccolo, A., Ammiraju, J. S. S., Talag, J., Danowitz, A., Rivera, L. F., Gschwend, A. R., Noutsos, C., Wu, C. C., Kao, S. M., Zeng, J. W., Wei, F. J., Zhao, Q., Feng, Q., El Baidouri, M., Carpentier, M. C., Lasserre, E., Cooke, R., Rosa Farias, D. D., Da Maia, L. C., Dos Santos, R. S., Nyberg, K. G., McNally, K. L., Mauleon, R., Alexandrov, N., Schmutz, J., Flowers, D., Fan, C., Weigel, D., Jena, K. K., Wicker, T., Chen, M., Han, B., Henry, R., Hsing, Y. I. C., Kurata, N., De Oliveira, A. C., Panaud, O., Jackson, S. A., Machado, C. A., Sanderson, M. J., Long, M., Ware, D. & Wing, R. A., Feb 1 2018, In : Nature Genetics. 50, 2, p. 285-296 12 p.

Research output: Contribution to journalArticle

100 Scopus citations

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

Wang, W., Mauleon, R., Hu, Z., Chebotarov, D., Tai, S., Wu, Z., Li, M., Zheng, T., Fuentes, R. R., Zhang, F., Mansueto, L., Copetti, D., Sanciangco, M., Palis, K. C., Xu, J., Sun, C., Fu, B., Zhang, H., Gao, Y., Zhao, X. & 51 others, Shen, F., Cui, X., Yu, H., Li, Z., Chen, M., Detras, J., Zhou, Y., Zhang, X., Zhao, Y., Kudrna, D., Wang, C., Li, R., Jia, B., Lu, J., He, X., Dong, Z., Xu, J., Li, Y., Wang, M., Shi, J., Li, J., Zhang, D., Lee, S., Hu, W., Poliakov, A., Dubchak, I., Ulat, V. J., Borja, F. N., Mendoza, J. R., Ali, J., Gao, Q., Niu, Y., Yue, Z., Naredo, M. E. B., Talag, J., Wang, X., Li, J., Fang, X., Yin, Y., Glaszmann, J. C., Zhang, J., Li, J., Hamilton, R. S., Wing, R. A., Ruan, J., Zhang, G., Wei, C., Alexandrov, N., McNally, K. L., Li, Z. & Leung, H., May 3 2018, In : Nature. 557, 7703, p. 43-49 7 p.

Research output: Contribution to journalArticle

200 Scopus citations

Genotyping by sequencing of rice interspecific backcross inbred lines identifies QTLs for grain weight and grain length

Bhatia, D., Wing, R. A., Yu, Y., Chougule, K., Kudrna, D. A., Lee, S., Rang, A. & Singh, K., Feb 1 2018, In : Euphytica. 214, 2, 41.

Research output: Contribution to journalArticle

9 Scopus citations

The rice genome revolution: from an ancient grain to Green Super Rice

Wing, R. A., Purugganan, M. D. & Zhang, Q., Jun 5 2018, (Accepted/In press) In : Nature Reviews Genetics. p. 1-13 13 p.

Research output: Contribution to journalArticle

41 Scopus citations
2017

Aflatoxin-free transgenic maize using host-induced gene silencing

Thakare, D., Zhang, J. ., Wing, R. A., Cotty, P. J. & Schmidt, M., Mar 1 2017, In : Science advances. 3, 3, e1602382.

Research output: Contribution to journalArticle

36 Scopus citations

A single-nucleotide polymorphism causes smaller grain size and loss of seed shattering during African rice domestication

Wu, W., Liu, X., Wang, M., Meyer, R. S., Luo, X., Ndjiondjop, M. N., Tan, L., Zhang, J. ., Wu, J., Cai, H., Sun, C., Wang, X., Wing, R. A. & Zhu, Z., May 8 2017, In : Nature Plants. 3, 17064.

Research output: Contribution to journalArticle

54 Scopus citations

Evolutionary analysis of the SUB1 locus across the Oryza genomes

dos Santos, R. S., Farias, D. D. R., Pegoraro, C., Rombaldi, C. V., Fukao, T., Wing, R. A. & de Oliveira, A. C., Dec 1 2017, In : Rice. 10, 1, 4.

Research output: Contribution to journalArticle

4 Scopus citations

Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti

Copetti, D., Búrquez, A., Bustamante, E., Charboneau, J. L. M., Childs, K. L., Eguiarte, L. E., Lee, S., Liu, T. L., McMahon, M. M., Whiteman, N. K., Wing, R. A., Wojciechowski, M. F. & Sanderson, M. J., Nov 7 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 45, p. 12003-12008 6 p.

Research output: Contribution to journalArticle

15 Scopus citations

Genetic variation for domestication-related traits revealed in a cultivated rice, Nipponbare (Oryza sativa ssp. japonica) × ancestral rice, O. nivara, mapping population

Eizenga, G. C., Sanchez, P. L., Jackson, A. K., Edwards, J. D., Hurwitz, B. L., Wing, R. A. & Kudrna, D. A., Nov 1 2017, In : Molecular Breeding. 37, 11, 135.

Research output: Contribution to journalArticle

4 Scopus citations

Rice SNP-seek database update: New SNPs, indels, and queries

Mansueto, L., Fuentes, R. R., Borja, F. N., Detras, J., Abrio-Santos, J. M., Chebotarov, D., Sanciangco, M., Palis, K., Copetti, D., Poliakov, A., Dubchak, I., Solovyev, V., Wing, R. A., Hamilton, R. S., Mauleon, R., McNally, K. L. & Alexandrov, N., Jan 1 2017, In : Nucleic acids research. 45, D1, p. D1075-D1081

Research output: Contribution to journalArticle

61 Scopus citations

Sequencing of Australian wild rice genomes reveals ancestral relationships with domesticated rice

Brozynska, M., Copetti, D., Furtado, A., Wing, R. A., Crayn, D., Fox, G., Ishikawa, R. & Henry, R. J., Jun 2017, In : Plant Biotechnology Journal. 15, 6, p. 765-774 10 p.

Research output: Contribution to journalArticle

20 Scopus citations

The asparagus genome sheds light on the origin and evolution of a young y chromosome

Harkess, A., Zhou, J., Xu, C., Bowers, J. E., Van Der Hulst, R., Ayyampalayam, S., Mercati, F., Riccardi, P., McKain, M. R., Kakrana, A., Tang, H., Ray, J., Groenendijk, J., Arikit, S., Mathioni, S. M., Nakano, M., Shan, H., Telgmann-Rauber, A., Kanno, A., Yue, Z. & 22 others, Chen, H., Li, W., Chen, Y., Xu, X., Zhang, Y., Luo, S., Chen, H., Gao, J., Mao, Z., Pires, J. C., Luo, M., Kudrna, D., Wing, R. A., Meyers, B. C., Yi, K., Kong, H., Lavrijsen, P., Sunseri, F., Falavigna, A., Ye, Y., Leebens-Mack, J. H. & Chen, G., Dec 1 2017, In : Nature communications. 8, 1, 1279.

Research output: Contribution to journalArticle

55 Scopus citations

The rice paradox: Multiple origins but single domestication in Asian Rice

Choi, J. Y., Platts, A. E., Fuller, D. Q., Hsing, Y. I., Wing, R. A., Purugganan, M. D. & Kim, Y., Apr 1 2017, In : Molecular Biology and Evolution. 34, 4, p. 969-979 11 p.

Research output: Contribution to journalArticle

76 Scopus citations

Young inversion with multiple linked QTLs under selection in a hybrid zone

Lee, C. R., Wang, B., Mojica, J. P., Mandáková, T., Prasad, K. V. S. K., Goicoechea, J. L., Perera, N., Hellsten, U., Hundley, H. N., Johnson, J., Grimwood, J., Barry, K., Fairclough, T., Jenkins, J. W., Yu, Y., Kudrna, D., Zhang, J., Talag, J., Golser, W., Ghattas, K. & 6 others, Schranz, M. E., Wing, R., Lysak, M. A., Schmutz, J., Rokhsar, D. S. & Mitchell-Olds, T., Apr 3 2017, In : Nature Ecology and Evolution. 1, 5, 0119.

Research output: Contribution to journalArticle

33 Scopus citations
2016

Data Descriptor: Building two indica rice reference genomes with PacBio long-read and Illumina paired-end sequencing data

Zhang, J. ., Chen, L. L., Sun, S., Kudrna, D. A., Copetti, D., Li, W., Mu, T., Jiao, W. B., Xing, F., Lee, S., Talag, J., Song, J. M., Du, B., Xie, W., Luo, M., Maldonado, C. E., Goicoechea, J. L., Xiong, L., Wu, C., Xing, Y. & 10 others, Zhou, D. X., Yu, S., Zhao, Y., Wang, G., Yu, Y., Luo, Y., Hurtado, B. E. P., Danowitz, A., Wing, R. A. & Zhang, Q., Sep 13 2016, In : Scientific data. 3, 160076.

Research output: Contribution to journalArticle

12 Scopus citations

Development and validation of cross-transferable and polymorphic DNA markers for detecting alien genome introgression in Oryza sativa from Oryza brachyantha

Ray, S., Bose, L. K., Ray, J., Ngangkham, U., Katara, J. L., Samantaray, S., Behera, L., Anumalla, M., Singh, O. N., Chen, M., Wing, R. A. & Mohapatra, T., Aug 1 2016, In : Molecular Genetics and Genomics. 291, 4, p. 1783-1794 12 p.

Research output: Contribution to journalArticle

3 Scopus citations

DNA methylation changes facilitated evolution of genes derived from Mutator-like transposable elements

Wang, J., Yu, Y., Tao, F., Zhang, J., Copetti, D., Kudrna, D., Talag, J., Lee, S., Wing, R. A. & Fan, C., May 6 2016, In : Genome biology. 17, 1, 92.

Research output: Contribution to journalArticle

11 Scopus citations

DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses

Wicker, T., Yu, Y., Haberer, G., Mayer, K. F. X., Marri, P. R., Rounsley, S., Chen, M., Zuccolo, A., Panaud, O., Wing, R. A. & Roffler, S., Sep 7 2016, In : Nature Communications. 7, 12790.

Research output: Contribution to journalArticle

19 Scopus citations

Evolution of plant genome architecture

Wendel, J. F., Jackson, S. A., Meyers, B. C. & Wing, R. A., Mar 1 2016, In : Genome Biology. 17, 1, 37.

Research output: Contribution to journalArticle

123 Scopus citations

Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63

Zhang, J., Chen, L. L., Xing, F., Kudrna, D. A., Yao, W., Copetti, D., Mu, T., Li, W., Song, J. M., Xie, W., Lee, S., Talag, J., Shao, L., An, Y., Zhang, C. L., Ouyang, Y., Sun, S., Jiao, W. B., Lv, F., Du, B. & 17 others, Luo, M., Maldonado, C. E., Goicoechea, J. L., Xiong, L., Wu, C., Xing, Y., Zhou, D. X., Yu, S., Zhao, Y., Wang, G., Yu, Y., Luo, Y., Zhou, Z. W., Hurtado, B. E. P., Danowitz, A., Wing, R. A. & Zhang, Q., Aug 30 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 35, p. E5163-E5171

Research output: Contribution to journalArticle

78 Scopus citations

Genome puzzle master (GPM): An integrated pipeline for building and editing pseudomolecules from fragmented sequences

Zhang, J., Kudrna, D., Mu, T., Li, W., Copetti, D., Yu, Y., Goicoechea, J. L., Lei, Y. & Wing, R. A., Oct 15 2016, In : Bioinformatics. 32, 20, p. 3058-3064 7 p.

Research output: Contribution to journalArticle

7 Scopus citations

The Cardamine hirsuta genome offers insight into the evolution of morphological diversity

Gan, X., Hay, A., Kwantes, M., Haberer, G., Hallab, A., Ioio, R. D., Hofhuis, H., Pieper, B., Cartolano, M., Neumann, U., Nikolov, L. A., Song, B., Hajheidari, M., Briskine, R., Kougioumoutzi, E., Vlad, D., Broholm, S., Hein, J., Meksem, K., Lightfoot, D. & 11 others, Shimizu, K. K., Shimizu-Inatsugi, R., Imprialou, M., Kudrna, D., Wing, R., Sato, S., Huijser, P., Filatov, D., Mayer, K. F. X., Mott, R. & Tsiantis, M., Oct 31 2016, In : Nature plants. 2, 16167.

Research output: Contribution to journalArticle

30 Scopus citations

The Dark Side of the Genome: Revealing the Native Transposable Element/Repeat Content of Eukaryotic Genomes

Copetti, D. & Wing, R. A., Dec 5 2016, In : Molecular Plant. 9, 12, p. 1664-1666 3 p.

Research output: Contribution to journalLetter

1 Scopus citations

The impact and origin of copy number variations in the Oryza species

Bai, Z., Chen, J., Liao, Y., Wang, M., Liu, R., Ge, S., Wing, R. A. & Chen, M., 2016, In : BMC Genomics. 17, 1, 261.

Research output: Contribution to journalArticle

15 Scopus citations

Tracing ancestor rice of Suriname Maroons back to its African origin

Van Andel, T. R., Meyer, R. S., Aflitos, S. A., Carney, J. A., Veltman, M. A., Copetti, D., Flowers, J. M., Havinga, R. M., Maat, H., Purugganan, M. D., Wing, R. A. & Schranz, M. E., Oct 3 2016, In : Nature plants. 2, 16149.

Research output: Contribution to journalLetter

9 Scopus citations
2015

Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species

Kim, K., Lee, S. C., Lee, J., Yu, Y., Yang, K., Choi, B. S., Koh, H. J., Waminal, N. E., Choi, H. I., Kim, N. H., Jang, W., Park, H. S., Lee, J., Lee, H. O., Joh, H. J., Lee, H. J., Park, J. Y., Perumal, S., Jayakodi, M., Lee, Y. S. & 11 others, Kim, B., Copetti, D., Kim, S., Kim, S., Lim, K. B., Kim, Y. D., Lee, J., Cho, K. S., Park, B. S., Wing, R. A. & Yang, T. J., Oct 28 2015, In : Scientific reports. 5, 15655.

Research output: Contribution to journalArticle

87 Scopus citations

Exceptional reduction of the plastid genome of saguaro cactus (Carnegiea gigantea): Loss of the ndh gene suite and inverted repeat 1

Sanderson, M. J., Copetti, D., Búrquez, A., Bustamante, E., Charboneau, J. L. M., Eguiarte, L. E., Kumar, S., Lee, H. O., Lee, J., McMahon, M., Steele, K., Wing, R., Yang, T. J., Zwickl, D. & Wojciechowski, M. F., Jul 1 2015, In : American journal of botany. 102, 7, p. 1115-1127 13 p.

Research output: Contribution to journalArticle

49 Scopus citations

Genome and Comparative Transcriptomics of African Wild Rice Oryza longistaminata Provide Insights into Molecular Mechanism of Rhizomatousness and Self-Incompatibility

Zhang, Y., Zhang, S., Liu, H., Fu, B., Li, L., Xie, M., Song, Y., Li, X., Cai, J., Wan, W., Kui, L., Huang, H., Lyu, J., Dong, Y., Wang, W., Huang, L., Zhang, J., Yang, Q., Shan, Q., Li, Q. & 8 others, Huang, W., Tao, D., Wang, M., Chen, M., Yu, Y., Wing, R. A., Wang, W. & Hu, F., Jan 1 2015, In : Molecular Plant. 8, 11, p. 1683-1686 4 p.

Research output: Contribution to journalLetter

20 Scopus citations

Harvesting rice's dispensable genome

Wing, R. A., Oct 1 2015, In : Genome Biology. 16, 1, 217.

Research output: Contribution to journalArticle

1 Scopus citations

Recurrent sequence exchange between homeologous grass chromosomes

Wicker, T., Wing, R. A. & Schubert, I., Nov 1 2015, In : Plant Journal. 84, 4, p. 747-759 13 p.

Research output: Contribution to journalArticle

2 Scopus citations

Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement

De Vega, J. J., Ayling, S., Hegarty, M., Kudrna, D., Goicoechea, J. L., Ergon, Å., Rognli, O. A., Jones, C., Swain, M., Geurts, R., Lang, C., Mayer, K. F. X., Rössner, S., Yates, S., Webb, K. J., Donnison, I. S., Oldroyd, G. E. D., Wing, R. A., Caccamo, M., Powell, W. & 2 others, Abberton, M. T. & Skøt, L., Nov 30 2015, In : Scientific reports. 5, 17394.

Research output: Contribution to journalArticle

46 Scopus citations

RiTE database: A resource database for genus-wide rice genomics and evolutionary biology

Copetti, D., Zhang, J., El Baidouri, M., Gao, D., Wang, J., Barghini, E., Cossu, R. M., Angelova, A., Maldonado L., C. E., Roffler, S., Ohyanagi, H., Wicker, T., Fan, C., Zuccolo, A., Chen, M., Costa de Oliveira, A., Han, B., Henry, R., Hsing, Y. I., Kurata, N. & 4 others, Wang, W., Jackson, S. A., Panaud, O. & Wing, R. A., Jul 22 2015, In : BMC genomics. 16, 1, 538.

Research output: Contribution to journalArticle

30 Scopus citations

Sequencing of 15 622 gene-bearing BACs clarifies the gene-dense regions of the barley genome

Muñoz-Amatriaín, M., Lonardi, S., Luo, M., Madishetty, K., Svensson, J. T., Moscou, M. J., Wanamaker, S., Jiang, T., Kleinhofs, A., Muehlbauer, G. J., Wise, R. P., Stein, N., Ma, Y., Rodriguez, E., Kudrna, D., Bhat, P. R., Chao, S., Condamine, P., Heinen, S., Resnik, J. & 29 others, Wing, R., Witt, H. N., Alpert, M., Beccuti, M., Bozdag, S., Cordero, F., Mirebrahim, H., Ounit, R., Wu, Y., You, F., Zheng, J., Simková, H., Dolezel, J., Grimwood, J., Schmutz, J., Duma, D., Altschmied, L., Blake, T., Bregitzer, P., Cooper, L., Dilbirligi, M., Falk, A., Feiz, L., Graner, A., Gustafson, P., Hayes, P. M., Lemaux, P., Mammadov, J. & Close, T. J., Oct 1 2015, In : Plant Journal. 84, 1, p. 216-227 12 p.

Research output: Contribution to journalArticle

23 Scopus citations

Transposons play an important role in the evolution and diversification of centromeres among closely related species

Gao, D., Jiang, N., Wing, R. A., Jiang, J. & Jackson, S. A., Apr 7 2015, In : Frontiers in Plant Science. 6, APR, 216.

Research output: Contribution to journalArticle

23 Scopus citations
2014

A reference genome for common bean and genome-wide analysis of dual domestications

Schmutz, J., McClean, P. E., Mamidi, S., Wu, G. A., Cannon, S. B., Grimwood, J., Jenkins, J., Shu, S., Song, Q., Chavarro, C., Torres-Torres, M., Geffroy, V., Moghaddam, S. M., Gao, D., Abernathy, B., Barry, K., Blair, M., Brick, M. A., Chovatia, M., Gepts, P. & 21 others, Goodstein, D. M., Gonzales, M., Hellsten, U., Hyten, D. L., Jia, G., Kelly, J. D., Kudrna, D., Lee, R., Richard, M. M. S., Miklas, P. N., Osorno, J. M., Rodrigues, J., Thareau, V., Urrea, C. A., Wang, M., Yu, Y., Zhang, M., Wing, R. A., Cregan, P. B., Rokhsar, D. S. & Jackson, S. A., Jul 2014, In : Nature Genetics. 46, 7, p. 707-713 7 p.

Research output: Contribution to journalArticle

505 Scopus citations