Tatiana Karafet

  • 4361 Citations
  • 31 h-Index
1977 …2019

Research output per year

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Research Output

  • 4361 Citations
  • 31 h-Index
  • 71 Article
  • 4 Chapter
  • 2 Letter
  • 1 Comment/debate
2019

Genomic evidence of local adaptation to climate and diet in indigenous Siberians

Hallmark, B., Karafet, T. M., Hsieh, P. H., Osipova, L. P., Watkins, J. C. & Hammer, M. F., 2019, In : Molecular biology and evolution. 36, 2, p. 315-327 13 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Identification of African-Specific Admixture between Modern and Archaic Humans

the GenomeAsia 100K Consortium, Dec 5 2019, In : American Journal of Human Genetics. 105, 6, p. 1254-1261 8 p.

Research output: Contribution to journalArticle

The GenomeAsia 100K Project enables genetic discoveries across Asia

GenomeAsia100K Consortium, Dec 5 2019, In : Nature. 576, 7785, p. 106-111 6 p.

Research output: Contribution to journalArticle

Open Access
6 Scopus citations
2018

Siberian genetic diversity reveals complex origins of the Samoyedic-speaking populations

Karafet, T. M., Osipova, L. P., Savina, O. V., Hallmark, B. & Hammer, M. F., Nov 1 2018, In : American Journal of Human Biology. 30, 6, e23194.

Research output: Contribution to journalArticle

1 Scopus citations
2017

Complex Patterns of Admixture across the Indonesian Archipelago

Hudjashov, G., Karafet, T. M., Lawson, D. J., Downey, S., Savina, O., Sudoyo, H., Lansing, J. S., Hammer, M. F. & Cox, M. P., Oct 1 2017, In : Molecular biology and evolution. 34, 10, p. 2439-2452 14 p.

Research output: Contribution to journalArticle

23 Scopus citations

Exome Sequencing Provides Evidence of Polygenic Adaptation to a Fat-Rich Animal Diet in Indigenous Siberian Populations

Hsieh, P. H., Hallmark, B., Watkins, J. C., Karafet, T., Osipova, L. P., Gutenkunst, R. N. & Hammer, M. F., Nov 1 2017, In : Molecular Biology and Evolution. 34, 11, p. 2913-2926 14 p.

Research output: Contribution to journalArticle

8 Scopus citations
2016

Coevolution of genes and languages and high levels of population structure among the highland populations of Daghestan

Karafet, T. M., Bulayeva, K. B., Nichols, J., Bulayev, O. A., Gurgenova, F., Omarova, J., Yepiskoposyan, L., Savina, O. V., Rodrigue, B. H. & Hammer, M. F., Mar 1 2016, In : Journal of human genetics. 61, 3, p. 181-191 11 p.

Research output: Contribution to journalArticle

10 Scopus citations

Small Traditional Human Communities Sustain Genomic Diversity over Microgeographic Scales despite Linguistic Isolation

Cox, M. P., Hudjashov, G., Sim, A., Savina, O., Karafet, T. M., Sudoyo, H. & Lansing, J. S., Sep 1 2016, In : Molecular biology and evolution. 33, 9, p. 2273-2284 12 p.

Research output: Contribution to journalArticle

7 Scopus citations

Whole exome sequencing reveals homozygous mutations in RAI1, OTOF, and SLC26A4 genes associated with nonsyndromic hearing loss in Altaian families (South Siberia)

Churbanov, A. Y., Karafet, T. M., Morozov, I. V., Mikhalskaia, V. Y., Zytsar, M. V., Bondar, A. A. & Posukh, O. L., Apr 1 2016, In : PloS one. 11, 4, e0153841.

Research output: Contribution to journalArticle

5 Scopus citations
2015

A recent bottleneck of Y chromosome diversity coincides with a global change in culture

Karmin, M., Saag, L., Vicente, M., Wilson Sayres, M. A., Järve, M., Talas, U. G., Rootsi, S., Ilumäe, A. M., Mägi, R., Mitt, M., Pagani, L., Puurand, T., Faltyskova, Z., Clemente, F., Cardona, A., Metspalu, E., Sahakyan, H., Yunusbayev, B., Hudjashov, G., DeGiorgio, M. & 80 others, Loogväli, E. L., Eichstaedt, C., Eelmets, M., Chaubey, G., Tambets, K., Litvinov, S., Mormina, M., Xue, Y., Ayub, Q., Zoraqi, G., Korneliussen, T. S., Akhatova, F., Lachance, J., Tishkoff, S., Momynaliev, K., Ricaut, F. X., Kusuma, P., Razafindrazaka, H., Pierron, D., Cox, M. P., Sultana, G. N. N., Willerslev, R., Muller, C., Westaway, M., Lambert, D., Skaro, V., Kovačević, L., Turdikulova, S., Dalimova, D., Khusainova, R., Trofimova, N., Akhmetova, V., Khidiyatova, I., Lichman, D. V., Isakova, J., Pocheshkhova, E., Sabitov, Z., Barashkov, N. A., Nymadawa, P., Mihailov, E., Seng, J. W. T., Evseeva, I., Migliano, A. B., Abdullah, S., Andriadze, G., Primorac, D., Atramentova, L., Utevska, O., Yepiskoposyan, L., Marjanović, D., Kushniarevich, A., Behar, D. M., Gilissen, C., Vissers, L., Veltman, J. A., Balanovska, E., Derenko, M., Malyarchuk, B., Metspalu, A., Fedorova, S., Eriksson, A., Manica, A., Mendez, F. L., Karafet, T. M., Veeramah, K. R., Bradman, N., Hammer, M. F., Osipova, L. P., Balanovsky, O., Khusnutdinova, E. K., Johnsen, K., Remm, M., Thomas, M. G., Tyler-Smith, C., Underhill, P. A., Willerslev, E., Nielsen, R., Metspalu, M., Villems, R. & Kivisild, T., Apr 1 2015, In : Genome Research. 25, 4, p. 459-466 8 p.

Research output: Contribution to journalArticle

144 Scopus citations

Extensive genome-wide autozygosity in the population isolates of Daghestan

Karafet, T., Bulayeva, K. B., Bulayev, O. A., Gurgenova, F., Omarova, J., Yepiskoposyan, L., Savina, O. V., Veeramah, K. R. & Hammer, M. F., Oct 22 2015, In : European Journal of Human Genetics. 23, 10, p. 1405-1412 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Improved phylogenetic resolution and rapid diversification of Y-chromosome haplogroup K-M526 in Southeast Asia

Karafet, T., Mendez, F. L., Sudoyo, H., Lansing, J. S. & Hammer, M. F., Mar 1 2015, In : European Journal of Human Genetics. 23, 3, p. 369-373 5 p.

Research output: Contribution to journalArticle

6 Scopus citations

Reconstructing past admixture processes from local genomic ancestry using wavelet transformation

Sanderson, J., Sudoyo, H., Karafet, T. M., Hammer, M. F. & Cox, M. P., Jan 1 2015, In : Genetics. 200, 2, p. 469-481 13 p.

Research output: Contribution to journalArticle

13 Scopus citations

Relaxed observance of traditional marriage rules allows social connectivity without loss of genetic diversity

Guillot, E. G., Hazelton, M. L., Karafet, T., Stephen Lansing, J., Sudoyo, H. & Cox, M. P., 2015, In : Molecular Biology and Evolution. 32, 9, p. 2254-2262 9 p.

Research output: Contribution to journalArticle

13 Scopus citations

Reply to 'The 'extremely ancient' chromosome that isn't' by Elhaik et al

Mendez, F. L., Veeramah, K. R., Thomas, M. G., Karafet, T. M. & Hammer, M. F., May 21 2015, In : European Journal of Human Genetics. 23, 5, p. 564-567 4 p.

Research output: Contribution to journalLetter

1 Scopus citations
2014

Different waves and directions of Neolithic migrations in the Armenian Highland

Hovhannisyan, A., Khachatryan, Z., Haber, M., Hrechdakian, P., Karafet, T., Zalloua, P. & Yepiskoposyan, L., 2014, In : Investigative Genetics. 5, 1, 15.

Research output: Contribution to journalArticle

7 Scopus citations

Isolation, contact and social behavior shaped genetic diversity in West Timor

Tumonggor, M. K., Karafet, T. M., Downey, S., Lansing, J. S., Norquest, P., Sudoyo, H., Hammer, M. F. & Cox, M. P., Sep 1 2014, In : Journal of human genetics. 59, 9, p. 494-503 10 p.

Research output: Contribution to journalArticle

11 Scopus citations
19 Scopus citations
2013

An African American paternal lineage adds an extremely ancient root to the human y chromosome phylogenetic tree

Mendez, F. L., Krahn, T., Schrack, B., Krahn, A. M., Veeramah, K. R., Woerner, A. E., Fomine, F. L. M., Bradman, N., Thomas, M. G., Karafet, T. M. & Hammer, M. F., Mar 7 2013, In : American Journal of Human Genetics. 92, 3, p. 454-459 6 p.

Research output: Contribution to journalArticle

75 Scopus citations

Erratum: An African American paternal lineage adds an extremely ancient root to the human y chromosome phylogenetic tree (American Journal of Human Genetics (2013) 92 (454-459))

Mendez, F. L., Krahn, T., Schrack, B., Krahn, A. M., Veeramah, K. R., Woerner, A. E., Fomine, F. L. M., Bradman, N., Thomas, M. G., Karafet, T. M. & Hammer, M. F., Apr 4 2013, In : American Journal of Human Genetics. 92, 4, 1 p.

Research output: Contribution to journalComment/debate

3 Scopus citations

Exome sequencing reveals new causal mutations in children with epileptic encephalopathies

Veeramah, K. R., Johnstone, L., Karafet, T. M., Wolf, D., Sprissler, R., Salogiannis, J., Barth-Maron, A., Greenberg, M. E., Stuhlmann, T., Weinert, S., Jentsch, T. J., Pazzi, M., Restifo, L. L., Talwar, D., Erickson, R. P. & Hammer, M. F., Jul 1 2013, In : Epilepsia. 54, 7, p. 1270-1281 12 p.

Research output: Contribution to journalArticle

154 Scopus citations

The Indonesian archipelago: An ancient genetic highway linking Asia and the Pacific

Tumonggor, M. K., Karafet, T. M., Hallmark, B., Lansing, J. S., Sudoyo, H., Hammer, M. F. & Cox, M. P., Mar 1 2013, In : Journal of human genetics. 58, 3, p. 165-173 9 p.

Research output: Contribution to journalArticle

53 Scopus citations
2012

Religion as a means to assure paternity

Strassmann, B. I., Kurapati, N. T., Hug, B. F., Burke, E. E., Gillespie, B. W., Karafet, T. M. & Hammer, M. F., Jun 19 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 25, p. 9781-9785 5 p.

Research output: Contribution to journalArticle

49 Scopus citations

The impact of Converso Jews on the genomes of modern Latin Americans

Velez, C., Palamara, P. F., Guevara-Aguirre, J., Hao, L., Karafet, T., Guevara-Aguirre, M., Pearlman, A., Oddoux, C., Hammer, M., Burns, E., Pe'Er, I., Atzmon, G. & Ostrer, H., Feb 1 2012, In : Human Genetics. 131, 2, p. 251-263 13 p.

Research output: Contribution to journalArticle

19 Scopus citations
2011

Increased resolution of y chromosome haplogroup t defines relationships among populations of the near east, Europe, and Africa

Mendez, F. L., Karafet, T. M., Krahn, T., Ostrer, H., Soodyall, H. & Hammer, M. F., Feb 1 2011, In : Human biology. 83, 1, p. 39-53 15 p.

Research output: Contribution to journalArticle

29 Scopus citations
2010
38 Scopus citations

Genome-wide patterns of population structure and admixture among Hispanic/Latino populations

Bryc, K., Velez, C., Karafet, T., Moreno-Estrada, A., Reynolds, A., Auton, A., Hammer, M. F., Bustamante, C. D. & Ostrer, H., Dec 30 2010, The Human Condition. National Academy of Sciences, Vol. 4. p. 147-166 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genome-wide patterns of population structure and admixture among Hispanic/Latino populations

Bryc, K., Velez, C., Karafet, T., Moreno-Estrada, A., Reynolds, A., Auton, A., Hammer, M., Bustamante, C. D. & Ostrer, H., May 11 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, SUPPL. 2, p. 8954-8961 8 p.

Research output: Contribution to journalArticle

238 Scopus citations

Major east-west division underlies y chromosome stratification across Indonesia

Karafet, T. M., Hallmark, B., Cox, M. P., Sudoyo, H., Downey, S., Lansing, J. S. & Hammer, M. F., 2010, In : Molecular biology and evolution. 27, 8, p. 1833-1844 12 p.

Research output: Contribution to journalArticle

94 Scopus citations
2009

Extended y chromosome haplotypes resolve multiple and unique lineages of the Jewish priesthood

Hammer, M. F., Behar, D. M., Karafet, T. M., Mendez, F. L., Hallmark, B., Erez, T., Zhivotovsky, L. A., Rosset, S. & Skorecki, K., Aug 10 2009, In : Human Genetics. 126, 5, p. 707-717 11 p.

Research output: Contribution to journalArticle

38 Scopus citations

Response

Hammer, M. F., Behar, D. M., Karafet, T. M., Mendez, F. L., Hallmark, B., Erez, T., Zhivotovsky, L. A., Rosset, S. & Skorecki, K., Oct 13 2009, In : Human Genetics. 126, 5, p. 725-726 2 p.

Research output: Contribution to journalLetter

2008

A DNA signature for the expansion of irrigation in Bali?

Stephen Lansing, J., Karafet, T. M., Schoenfelder, J. & Hammer, M. F., Jul 28 2008, Past Human Migrations in East Asia: Matching Archaeology, Linguistics and Genetics. Routledge Taylor & Francis Group, p. 376-394 19 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Scopus citations

Distribution of Y chromosomes among native North Americans: A study of Athapaskan population history

Malhi, R. S., Gonzalez-Oliver, A., Schroeder, K. B., Kemp, B. M., Greenberg, J. A., Dobrowski, S. Z., Smith, D. G., Resendez, A., Karafet, T., Hammer, M., Zegura, S. & Brovko, T., Dec 1 2008, In : American Journal of Physical Anthropology. 137, 4, p. 412-424 13 p.

Research output: Contribution to journalArticle

42 Scopus citations

Machine-learning approaches for classifying haplogroup from Y chromosome STR data

Schlecht, J., Kaplan, M. E., Barnard, K., Karafet, T., Hammer, M. F. & Merchant, N. C., Jun 2008, In : PLoS computational biology. 4, 6, e1000093.

Research output: Contribution to journalArticle

34 Scopus citations

Male dominance rarely skews the frequency distribution of Y chromosome haplotypes in human populations

Lansing, J. S., Watkins, J. C., Hallmark, B., Cox, M. P., Karafet, T. M., Sudoyo, H. & Hammer, M. F., Aug 19 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 33, p. 11645-11650 6 p.

Research output: Contribution to journalArticle

31 Scopus citations

New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree

Karafet, T. M., Mendez, F. L., Meilerman, M. B., Underhill, P. A., Zegura, S. L. & Hammer, M. F., May 2008, In : Genome Research. 18, 5, p. 830-838 9 p.

Research output: Contribution to journalArticle

601 Scopus citations

Testing for archaic hominin admixture on the X chromosome: Model likelihoods for the modern human RRM2P4 region from summaries of genealogical topology under the structured coalescent

Cox, M. P., Mendez, F. L., Karafet, T. M., Pilkington, M. M., Kingan, S. B., Destro-Bisol, G., Strassmann, B. I. & Hammer, M. F., Jan 2008, In : Genetics. 178, 1, p. 427-437 11 p.

Research output: Contribution to journalArticle

24 Scopus citations

The effect of history and lifestyle on genetic structure of North Asian populations

Karafet, T. M., Osipova, L. P. & Hammer, M. F., Jul 28 2008, Past Human Migrations in East Asia: Matching Archaeology, Linguistics and Genetics. Routledge Taylor & Francis Group, p. 395-415 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations
2007

A paleogenetic study of the prehistoric populations of the Altai

Chikisheva, T. A., Gubina, M. A., Kulikov, I. V., Karafet, T. M., Voevoda, M. I. & Romaschenko, A. G., Dec 1 2007, In : Archaeology, Ethnology and Anthropology of Eurasia. 32, 1, p. 130-142 13 p.

Research output: Contribution to journalArticle

11 Scopus citations

A Polynesian motif on the Y chromosome: Population structure in remote Oceania

Cox, M. P., Redd, A. J., Karafet, T. M., Ponder, C. A., Lansing, J. S., Sudoyo, H. & Hammer, M. F., Oct 2007, In : Human biology. 79, 5, p. 525-535 11 p.

Research output: Contribution to journalArticle

18 Scopus citations

Coevolution of languages and genes on the island of Sumba, eastern Indonesia

Lansing, J. S., Cox, M. P., Downey, S. S., Gabler, B. M., Hallmark, B., Karafet, T. M., Norquest, P., Schoenfelder, J. W., Sudoyo, H., Watkins, J. C. & Hammer, M. F., Oct 9 2007, In : Proceedings of the National Academy of Sciences of the United States of America. 104, 41, p. 16022-16026 5 p.

Research output: Contribution to journalArticle

54 Scopus citations

Y Chromosome Variation in Northern Island Melanesia

Scheinfeldt, L. B., Friedlaender, F. R., Friedlaender, J. S., Latham, K., Koki, G., Karafet, T., Hammer, M. & Lorenz, J., Sep 1 2007, Population Genetics, Linguistics, and Culture History in the Southwest Pacific. Oxford University Press

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations
2006

Dual origins of the Japanese: Common ground for hunter-gatherer and farmer Y chromosomes

Hammer, M. F., Karafet, T. M., Park, H., Omoto, K., Harihara, S., Stoneking, M. & Horai, S., Jan 1 2006, In : Journal of human genetics. 51, 1, p. 47-58 12 p.

Research output: Contribution to journalArticle

181 Scopus citations

Genetic structure among 38 populations from the United States based on 11 U.S. core Y chromosome STRs

Redd, A. J., Chamberlain, V. F., Kearney, V. F., Stover, D., Karafet, T., Calderon, K., Walsh, B. & Hammer, M. F., May 1 2006, In : Journal of Forensic Sciences. 51, 3, p. 580-585 6 p.

Research output: Contribution to journalArticle

20 Scopus citations

Population structure of Y chromosome SNP haplogroups in the United States and forensic implications for constructing Y chromosome STR databases

Hammer, M. F., Chamberlain, V. F., Kearney, V. F., Stover, D., Zhang, G., Karafet, T., Walsh, B. & Redd, A. J., Dec 1 2006, In : Forensic Science International. 164, 1, p. 45-55 11 p.

Research output: Contribution to journalArticle

41 Scopus citations

Unexpected NRY chromosome variation in Northern Island Melanesia

Scheinfeldt, L., Friedlaender, F., Friedlaender, J., Latham, K., Koki, G., Karafet, T., Hammer, M. & Lorenz, J., Aug 1 2006, In : Molecular biology and evolution. 23, 8, p. 1628-1641 14 p.

Research output: Contribution to journalArticle

40 Scopus citations
2005

Balinese Y-chromosome perspective on the peopling of Indonesia: Genetic contributions from pre-neolithic hunter-gatherers, Austronesian farmers, and Indian traders

Karafet, T. M., Lansing, J. S., Redd, A. J., Reznikova, S., Watkins, J. C., Surata, S. P. K., Arthawiguna, W. A., Mayer, L., Bamshad, M., Jorde, L. B. & Hammer, M. F., Feb 1 2005, In : Human biology. 77, 1, p. 93-114 22 p.

Research output: Contribution to journalArticle

63 Scopus citations
2004

An Indian trader in ancient Bali?

Lansing, J. S., Redd, A. J., Karafet, T. M., Watkins, J., Ardika, I. W., Surata, S. P. K., Schoenfelder, J. S., Campbell, M., Merriwether, A. M. & Hammer, M. F., Jun 2004, In : Antiquity. 78, 300, p. 287-293 7 p.

Research output: Contribution to journalArticle

16 Scopus citations

Contrasting patterns of Y chromosome variation in Ashkenazi Jewish and host non-Jewish European populations

Behar, D. M., Garrigan, D., Kaplan, M. E., Mobasher, Z., Rosengarten, D., Karafet, T. M., Quintana-Murci, L., Ostrer, H., Skorecki, K. & Hammer, M. F., Mar 1 2004, In : Human Genetics. 114, 4, p. 354-365 12 p.

Research output: Contribution to journalArticle

66 Scopus citations

High-Resolution SNPs and Microsatellite Haplotypes Point to a Single, Recent Entry of Native American Y Chromosomes into the Americas

Zegura, S. L., Karafet, T. M., Zhivotovsky, L. A. & Hammer, M. F., Jan 1 2004, In : Molecular biology and evolution. 21, 1, p. 164-175 12 p.

Research output: Contribution to journalArticle

198 Scopus citations