Find Research Outputs

2018

A gapmer aptamer nanobiosensor for real-time monitoring of transcription and translation in single cells

Wang, S., Xiao, Y., Zhang, D. & Wong, P. K., Feb 1 2018, In : Biomaterials. 156, p. 56-64 9 p.

Research output: Contribution to journalArticle

Transcription
Monitoring
Nucleic Acid Probes
Proteins
Messenger RNA
2 Citations

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

Harper, L., Campbell, J., Cannon, E. K. S., Jung, S., Poelchau, M., Walls, R., Andorf, C., Arnaud, E., Berardini, T. Z., Birkett, C., Cannon, S., Carson, J., Condon, B., Cooper, L., Dunn, N., Elsik, C. G., Farmer, A., Ficklin, S. P., Grant, D., Grau, E. & 32 othersHerndon, N., Hu, Z. L., Humann, J., Jaiswal, P., Jonquet, C., Laporte, M. A., Larmande, P., Lazo, G., McCarthy, F. M., Menda, N., Mungall, C. J., Munoz-Torres, M. C., Naithani, S., Nelson, R., Nesdill, D., Park, C., Reecy, J., Reiser, L., Sanderson, L. A., Sen, T. Z., Staton, M., Subramaniam, S., Tello-Ruiz, M. K., Unda, V., Unni, D., Wang, L., Ware, D., Wegrzyn, J., Williams, J., Woodhouse, M., Yu, J. & Main, D., Jan 1 2018, In : Database. 2018, 2018

Research output: Contribution to journalArticle

Genetic Databases
Genomics
Agriculture
Databases
agriculture

Age-associated changes in waking hippocampal sharp-wave ripples

Cowen, S. L., Gray, D. T., Wiegand, J. P. L., Schimanski, L. A. & Barnes, C. A., Jan 1 2018, (Accepted/In press) In : Hippocampus.

Research output: Contribution to journalArticle

Sleep
Reward
Running
Inbred F344 Rats
Task Performance and Analysis
County Hospitals
Age Factors
Retrospective Studies
Endometrial Neoplasms
Cell Biology
3 Citations

Age-dependent leaf physiology and consequences for crown-scale carbon uptake during the dry season in an Amazon evergreen forest

Albert, L. P., Wu, J., Prohaska, N., de Camargo, P. B., Huxman, T. E., Tribuzy, E. S., Ivanov, V. Y., Oliveira, R. S., Garcia, S., Smith, M. N., Oliveira Junior, R. C., Restrepo-Coupe, N., da Silva, R., Stark, S. C., Martins, G. A., Penha, D. V. & Saleska, S., Jan 1 2018, (Accepted/In press) In : New Phytologist.

Research output: Contribution to journalArticle

Crowns
tree crown
dry season
Carbon
physiology

Age-induced acceleration of time: Implications for intertemporal choice

Lemoine, D. M., Sep 1 2018, In : Journal of Economic Behavior and Organization. 153, p. 143-152 10 p.

Research output: Contribution to journalArticle

Intertemporal choice
Dynamic inconsistency
Preference reversal
Discount rate
Compression

Age-modulated associations between KIBRA, brain volume, and verbal memory among healthy older adults

Stickel, A., Kawa, K., Walther, K., Glisky, E. L., Richholt, R., Huentelman, M. & Ryan, T. L., Jan 10 2018, In : Frontiers in Aging Neuroscience. 9, JAN, 431.

Research output: Contribution to journalArticle

Homozygote
Brain
Apolipoprotein E4
Occipital Lobe
Confounding Factors (Epidemiology)
Hispanic Americans
Weight Loss
Randomized Controlled Trials
Obesity
Social Media

A general design and optimization method of tightly-coupled cross-dipoles for base station

Ding, C., Sun, H., Guo, Y. J. & Ziolkowski, R. W., Jan 1 2018.

Research output: Contribution to conferencePaper

Base stations
1 Citations

A gene signature that distinguishes conventional and leukemic nonnodal mantle cell lymphoma helps predict outcome

Clot, G., Jares, P., Giné, E., Navarro, A., Royo, C., Pinyol, M., Martín-Garcia, D., Demajo, S., Espinet, B., Salar, A., Ferrer, A., Muntañola, A., Aymerich, M., Rauert-Wunderlich, H., Jaffe, E. S., Connors, J. M., Gascoyne, R. D., Delabie, J., López-Guillermo, A., Ott, G. & 7 othersWright, G. W., Staudt, L. M., Rosenwald, A., Scott, D. W., Rimsza, L. M., Beà, S. & Campo, E., Jul 26 2018, In : Blood. 132, 4, p. 413-422 10 p.

Research output: Contribution to journalArticle

Mantle-Cell Lymphoma
Assays
Genes
Survival
Aberrations

A geostatistical inverse approach to characterize the spatial distribution of deformability and shear strength of rock mass around an unlined rock cavern

Gao, X., Chuan Yan, E., Yeh, T-C. J., Cai, J. S., Liang, Y. & Wang, M., Nov 1 2018, In : Engineering Geology. 245, p. 106-119 14 p.

Research output: Contribution to journalArticle

cavern
Formability
Shear strength
shear strength
Spatial distribution
1 Citations

Age-related climate sensitivity in Pinus Edulis at Dinosaur National Monument, Colorado, USA

Hanna, D. P., Falk, D., Swetnam, T. & Romme, W., Dec 1 2018, In : Dendrochronologia. 52, p. 40-47 8 p.

Research output: Contribution to journalArticle

Pinus edulis
dinosaur
monument
climate
tree age
1 Citations

A giant protocluster of galaxies at redshift 5.7

Jiang, L., Wu, J., Bian, F., Chiang, Y. K., Ho, L. C., Shen, Y., Zheng, Z. Y., Bailey, J. I., Blanc, G. A., Crane, J. D., Fan, X., Mateo, M., Olszewski, E. W., Oyarzún, G. A., Wang, R. & Wu, X. B., Dec 1 2018, In : Nature Astronomy. 2, 12, p. 962-966 5 p.

Research output: Contribution to journalLetter

galaxies
universe
sky
emitters
x rays
14 Citations

A global ocean atlas of eukaryotic genes

Carradec, Q., Pelletier, E., Da Silva, C., Alberti, A., Seeleuthner, Y., Blanc-Mathieu, R., Lima-Mendez, G., Rocha, F., Tirichine, L., Labadie, K., Kirilovsky, A., Bertrand, A., Engelen, S., Madoui, M. A., Méheust, R., Poulain, J., Romac, S., Richter, D. J., Yoshikawa, G., Dimier, C. & 33 othersKandels-Lewis, S., Picheral, M., Searson, S., Acinas, S. G., Boss, E., Follows, M., Gorsky, G., Grimsley, N., Karp-Boss, L., Krzic, U., Pesant, S., Reynaud, E. G., Sardet, C., Sieracki, M., Speich, S., Stemmann, L., Velayoudon, D., Weissenbach, J., Jaillon, O., Aury, J. M., Karsenti, E., Sullivan, M., Sunagawa, S., Bork, P., Not, F., Hingamp, P., Raes, J., Guidi, L., Ogata, H., De Vargas, C., Iudicone, D., Bowler, C. & Wincker, P., Dec 1 2018, In : Nature Communications. 9, 1, 373.

Research output: Contribution to journalArticle

Atlases
Oceans and Seas
genes
oceans
Genes

A Gneato nuclear genome

Barker, M. S., Feb 1 2018, In : Nature Plants. 4, 2, p. 63-64 2 p.

Research output: Contribution to journalShort survey

nuclear genome
1 Citations

Agreements with reciprocity: Co-financing and MOUs

Jang, D., Patel, A. & Dufwenberg, M., Sep 1 2018, In : Games and Economic Behavior. 111, p. 85-99 15 p.

Research output: Contribution to journalArticle

Financing

A ground-truth fusion method for image segmentation evaluation

Malladi, S. R. S. P., Ram, S. & Rodriguez, J. J., Sep 21 2018, 2018 IEEE Southwest Symposium on Image Analysis and Interpretation, SSIAI 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-April. p. 137-140 4 p. 8470317

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image segmentation
Fusion reactions

A hierarchical decision-making process in social networks for disaster management

Lee, S. & Son, Y-J., Jan 1 2018, p. 814-819. 6 p.

Research output: Contribution to conferencePaper

Disasters
Decision making
Application programs
Innovation
Smartphones
pedotransfer function
water retention
hydraulic property
parameterization
soil

A histologically hostile environment made more hospitable?

Armstrong, D. G. & Gurtner, G. C., Sep 1 2018, In : Nature Reviews Endocrinology. 14, 9, p. 511-512 2 p.

Research output: Contribution to journalArticle

Diabetic Foot
Diabetes Mellitus
Therapeutics

A history and progress of research on boundary-layer transition on a mach 6 flared cone

Chynoweth, B. C., Schneider, S. P., Hader, C., Fasel, H. F., Batista, A., Kuehl, J., Juliano, T. J. & Wheaton, B., Jan 1 2018, AIAA Aerospace Sciences Meeting. 210059 ed. American Institute of Aeronautics and Astronautics Inc, AIAA

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mach number
Cones
Boundary layers
Heating
Wave packets
1 Citations

Aircraft Measurements of Total Mercury and Monomethyl Mercury in Summertime Marine Stratus Cloudwater from Coastal California, USA

Weiss-Penzias, P., Sorooshian, A., Coale, K., Heim, W., Crosbie, E., Dadashazar, H., Macdonald, A. B., Wang, Z. & Jonsson, H., Mar 6 2018, In : Environmental Science and Technology. 52, 5, p. 2527-2537 11 p.

Research output: Contribution to journalArticle

stratus
airborne survey
Mercury
Aircraft
ocean

A Joint Reconstruction and Segmentation Method for Limited-Angle X-Ray Tomography

Wei, Z., Liu, B., Dong, B. & Wei, L., Jan 31 2018, In : IEEE Access. 6, p. 7780-7791 12 p.

Research output: Contribution to journalArticle

Image segmentation
Tomography
X rays
Image reconstruction
Industrial applications

Ajp-cell physiology begins landmark reviews in cell physiology: An editorial from the senior editors of ajp-cell physiology

Delpire, E., Hamilton, K. L., Hawke, T. J., Isenberg, J. S., Lotersztajn, S., Yuan, J. & Adams, J. C., Jan 1 2018, In : American Journal of Physiology - Cell Physiology. 314, 1, p. C1-C2

Research output: Contribution to journalEditorial

Cell Physiological Phenomena

A Kappa Opioid Receptor Agonist Blocks Bone Cancer Pain Without Altering Bone Loss, Tumor Size, or Cancer Cell Proliferation in a Mouse Model of Cancer-Induced Bone Pain

Edwards, K. A., Havelin, J. J., Mcintosh, M. I., Ciccone, H. A., Pangilinan, K., Imbert, I., Largent-Milnes, T. M., King, T., Vanderah, T. W. & Streicher, J. M., Jan 1 2018, (Accepted/In press) In : Journal of Pain.

Research output: Contribution to journalArticle

Bone Neoplasms
kappa Opioid Receptor
Cell Proliferation
Bone and Bones
Pain
2 Citations

Akt2 (protein kinase B beta) stabilizes ATP7A, a copper transporter for extracellular superoxide dismutase, in vascular smooth muscle: Novel mechanism to limit endothelial dysfunction in type 2 diabetes mellitus

Sudhahar, V., Okur, M. N., Bagi, Z., O'Bryan, J. P., Hay, N., Makino, A., Patel, V. S., Phillips, S. A., Stepp, D., Ushio-Fukai, M. & Fukai, T., Jan 1 2018, In : Arteriosclerosis, Thrombosis, and Vascular Biology. 38, 3, p. 529-541 13 p.

Research output: Contribution to journalArticle

Proto-Oncogene Proteins c-akt
Vascular Smooth Muscle
Type 2 Diabetes Mellitus
Superoxide Dismutase
Copper

Albumin disposition in critically Ill patients

Erstad, B. L., Jan 1 2018, (Accepted/In press) In : Journal of Clinical Pharmacy and Therapeutics.

Research output: Contribution to journalArticle

Critical Illness
Albumins
Healthy Volunteers
Septic Shock
PubMed

Alcohol metabolism in the progression of human nonalcoholic steatohepatitis

Li, H., Toth, E. & Cherrington, N. J., Jan 1 2018, In : Toxicological Sciences. 164, 2, p. 428-438 11 p.

Research output: Contribution to journalArticle

Aldehyde Dehydrogenase
Metabolism
Alcohol Dehydrogenase
Alcohols
Liver
47 Citations

Alcohol use and burden for 195 countries and territories, 1990–2016: a systematic analysis for the Global Burden of Disease Study 2016

GBD 2016 Alcohol Collaborators, Sep 22 2018, In : The Lancet. 392, 10152, p. 1015-1035 21 p.

Research output: Contribution to journalArticle

Alcohols
Quality-Adjusted Life Years
Uncertainty
Alcohol Drinking
Health
3 Citations

A leaf wax biomarker record of early Pleistocene hydroclimate from West Turkana, Kenya

Lupien, R. L., Russell, J. M., Feibel, C., Beck, C., Castañeda, I., Deino, A. & Cohen, A., Apr 15 2018, In : Quaternary Science Reviews. 186, p. 225-235 11 p.

Research output: Contribution to journalArticle

wax
waxes
Kenya
biomarker
biomarkers

ALES: Overview and upgrades

Skemer, A. J., Hinz, P. M., Stone, J., Skrutskie, M., Woodward, C. E., Leisenring, J. & Briesemeister, Z., Jan 1 2018, Ground-based and Airborne Instrumentation for Astronomy VII. Simard, L., Simard, L., Evans, C. J. & Takami, H. (eds.). SPIE, Vol. 10702. 107020C

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Exoplanets
extrasolar planets
Spectroscopy
Wavelength
spectroscopy

Algae-based sorbents for removal of gallium from semiconductor manufacturing wastewater

Li, M., Shadman, F. & Ogden, K. L., Jan 27 2018, (Accepted/In press) In : Clean Technologies and Environmental Policy. p. 1-9 9 p.

Research output: Contribution to journalArticle

gallium
Gallium
Algae
Sorbents
Wastewater

Algebraic generating functions for Gegenbauer polynomials

Maier, R. S., Jan 12 2018, Frontiers In Orthogonal Polynomials and Q-series. World Scientific Publishing Co. Pte Ltd, Vol. 1. p. 425-444 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Gegenbauer Polynomials
Algebraic function
Generating Function
Poisson Kernel
Legendre function

Algiers: A colonial metropolis transformed to a global city (ca. 1800-1954)

Clancy-Smith, J. A., Jan 1 2018, Places of Encounter: Time, Place, and Connectivity in World History: Volume II. Taylor and Francis, p. 141-159 19 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Colonies
Global City
Algeria
Metropolis
France
1 Citations

A light-fluence-independent method for the quantitative analysis of dynamic contrast-enhanced multispectral optoacoustic tomography (DCE MSOT)

Hupple, C. W., Morscher, S., Burton, N. C., Pagel, M. M., McNally, L. R. & Cárdenas-Rodríguez, J., Jun 1 2018, In : Photoacoustics. 10, p. 54-64 11 p.

Research output: Contribution to journalArticle

quantitative analysis
fluence
tomography
Tomography
Light

A light-gated potassium channel for sustained neuronal inhibition

Alberio, L., Locarno, A., Saponaro, A., Romano, E., Bercier, V., Albadri, S., Simeoni, F., Moleri, S., Pelucchi, S., Porro, A., Marcello, E., Barsotti, N., Kukovetz, K., Boender, A. J., Contestabile, A., Luo, S., Moutal, A., Ji, Y., Romani, G., Beltrame, M. & 8 othersDel Bene, F., Di Luca, M., Khanna, R., Colecraft, H. M., Pasqualetti, M., Thiel, G., Tonini, R. & Moroni, A., Nov 1 2018, In : Nature Methods. 15, 11, p. 969-976 8 p.

Research output: Contribution to journalArticle

Potassium Channels
Neurons
Lighting
Light
Optogenetics
1 Citations

Aligned metal absorbers and the ultraviolet background at the end of reionization

Doughty, C., Finlator, K., Oppenheimer, B. D., Dave, R. S. & Zackrisson, E., Apr 21 2018, In : Monthly Notices of the Royal Astronomical Society. 475, 4, p. 4717-4727 11 p.

Research output: Contribution to journalArticle

absorbers
ionization
metal
metals
simulation
1 Citations

Alignment of a three-mirror telescope using the sine condition test

Sommitz, D. & Dubin, M. B., Jan 1 2018, Optical System Alignment, Tolerancing, and Verification XII. Sasian, J. & Youngworth, R. N. (eds.). SPIE, Vol. 10747. 1074702

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Telescopes
Telescope
Mirror
Mirrors
Alignment

All-dielectric metasurface lenses for focal plane arrays operating in mid-wave infrared spectrum

Yilmaz, N., Ozdemir, A., Bagci, F. T., Takashima, Y. & Kurt, H., Jan 1 2018, Metamaterials, Metadevices, and Metasystems 2018. Zheludev, N. I., Engheta, N., Noginov, M. A. & Zheludev, N. I. (eds.). SPIE, Vol. 10719. 1071915

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Focal plane arrays
focal plane devices
Crosstalk
Focal Plane
crosstalk

All-fiber dissipative soliton Raman laser based on phosphosilicate fiber

Batjargal, O., Ou, Y. H., Keikens, K., Barton, J. K. & Kieu, K. Q., Jan 1 2018, (Accepted/In press) In : IEEE Photonics Technology Letters.

Research output: Contribution to journalArticle

Raman lasers
Solitons
solitary waves
fibers
Fibers

All-fiber dissipative soliton Raman laser for deep tissue multiphoton imaging

Batjargal, O., Barton, J. K. & Kieu, K. Q., Jan 1 2018, CLEO: Science and Innovations, CLEO_SI 2018. OSA - The Optical Society, Vol. Part F94-CLEO_SI 2018.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Solitons
Tissue
Imaging techniques
Fibers
Lasers

All-fiber dissipative soliton Raman laser for deep tissue multiphoton imaging

Batjargal, O., Barton, J. K. & Kieu, K. Q., Aug 6 2018, 2018 Conference on Lasers and Electro-Optics, CLEO 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 8427586

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Raman lasers
Solitons
fiber lasers
solitary waves
Tissue
1 Citations

Allocation of spectral and spatial modes in multidimensional metro-access optical networks

Gao, W. & Cvijetic, M., Apr 15 2018, In : Optics Communications. 413, p. 80-86 7 p.

Research output: Contribution to journalArticle

Fiber optic networks
Network architecture
Channel capacity
Multiplexing
Transparency
28 Citations

ALMA continuum observations of the protoplanetary disk AS 209: Evidence of multiple gaps opened by a single planet ?

Fedele, D., Tazzari, M., Booth, R., Testi, L., Clarke, C. J., Pascucci, I., Kospal, A., Semenov, D., Bruderer, S., Henning, T. & Teague, R., Feb 1 2018, In : Astronomy and Astrophysics. 610, A24.

Research output: Contribution to journalArticle

protoplanetary disks
planets
planet
continuums
dust

ALMA Polarimetry of Sgr A∗: Probing the Accretion Flow from the Event Horizon to the Bondi Radius

Bower, G. C., Broderick, A., Dexter, J., Doeleman, S., Falcke, H., Fish, V., Johnson, M. D., Marrone, D. P., Moran, J. M., Moscibrodzka, M., Peck, A., Plambeck, R. L. & Rao, R., Dec 1 2018, In : Astrophysical Journal. 868, 2, 101.

Research output: Contribution to journalArticle

event horizon
polarimetry
accretion
Faraday effect
radii

A locking clamp that enables high thermal and vibrational stability for kinematic optical mounts

Kautz, M., Close, L. M. & Males, J. R., Jan 1 2018, Adaptive Optics Systems VI. Schmidt, D., Schreiber, L. & Close, L. M. (eds.). SPIE, Vol. 10703. 107032Q

Research output: Chapter in Book/Report/Conference proceedingConference contribution

clamps
Clamping devices
Locking
locking
Kinematics

A locus on chromosome 5 shows African ancestry-limited association with alloimmunization in sickle cell disease

Williams, L. M., Qi, Z., Batai, K., Hooker, S., Hall, N. J., Machado, R. F., Chen, A., Campbell-Lee, S., Guan, Y., Kittles, R. A. & Hanchard, N. A., Dec 26 2018, In : Blood advances. 2, 24, p. 3637-3647 11 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 5
Sickle Cell Anemia
Isoantibodies
Genome
Haplotypes

A LONGITUDINAL, PERSON-CENTERED ANALYSIS OF EARLY HEAD START MOTHERS’ PARENTING

Paschall, K. W. & Mastergeorge, A. M., Jan 1 2018, In : Infant Mental Health Journal. 39, 1, p. 70-84 15 p.

Research output: Contribution to journalArticle

Parenting
Mothers
Family Conflict
Demography
Depression

Along-Strike Variation in the Magmatic Tempo of the Coast Mountains Batholith, British Columbia, and Implications for Processes Controlling Episodicity in Arcs

Cecil, M. R., Rusmore, M. E., Gehrels, G. E., Woodsworth, G. J., Stowell, H. H., Yokelson, I. N., Chisom, C., Trautman, M. & Homan, E., Jan 1 2018, (Accepted/In press) In : Geochemistry, Geophysics, Geosystems.

Research output: Contribution to journalArticle

British Columbia
batholith
coasts
mountains
Coastal zones
1 Citations

A low-fat dietary pattern and diabetes: A secondary analysis from the women's health initiative dietary modification trial

Howard, B. V., Aragaki, A. K., Tinker, L. F., Allison, M., Hingle, M. D., Johnson, K. C., Manson, J. A. E., Shadyab, A. H., Shikany, J. M., Snetselaar, L. G., Thomson, C., Zaslavsky, O. & Prentice, R. L., Apr 1 2018, In : Diabetes Care. 41, 4, p. 680-687 8 p.

Research output: Contribution to journalArticle

Diet Therapy
Dietary Fats
Women's Health
Insulin
Glucose