Characterization and function of putative substrate specificity domain in microvirus external scaffolding proteins

Asako Uchiyama, Min Chen, Bentley A Fane

Research output: Contribution to journalArticle

15 Citations (Scopus)

Abstract

Microviruses (canonical members are bacteriophages φX174, G4, and α3) are T=1 icosahedral virions with an assembly pathway mediated by two scaffolding proteins. The external scaffolding protein D plays a major role during morphogenesis, particularly in icosahedral shell formation. The results of previous studies, conducted with a cloned chimeric external scaffolding gene, suggest that the first α-helix acts as a substrate specificity domain, perhaps mediating the initial coat-external scaffolding protein interaction. However, the expression of a cloned gene could lead to protein concentrations higher than those found in typical infections. Moreover, its induction before infection could alter the timing of the protein's accumulation. Both of these factors could drive or facilitate reactions that may not occur under physiological conditions or before programmed cell lysis. In order to elucidate a more detailed mechanistic model, a chimeric external scaffolding gene was placed directly in the φX174 genome under wild-type transcriptional and translational control, and the chimeric virus, which was not viable on the level of plaque formation, was characterized. The results of the genetic and biochemical analyses indicate that α-helix 1 most likely mediates the nucleation reaction for the formation of the first assembly intermediate containing the external scaffolding protein. Mutants that can more efficiently use the chimeric scaffolding protein were isolated. These second-site mutations appear to act on a kinetic level, shortening the lag phase before virion production, perhaps lowering the critical concentration of the chimeric protein required for a nucleation reaction.

Original languageEnglish (US)
Pages (from-to)8587-8592
Number of pages6
JournalJournal of Virology
Volume81
Issue number16
DOIs
StatePublished - Aug 2007

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Microvirus
scaffolding proteins
substrate specificity
Substrate Specificity
recombinant fusion proteins
Proteins
virion
Microviridae
Virion
mechanistic models
coat proteins
shortenings
infection
bacteriophages
morphogenesis
Genes
genes
proteins
mutation
kinetics

ASJC Scopus subject areas

  • Immunology

Cite this

Characterization and function of putative substrate specificity domain in microvirus external scaffolding proteins. / Uchiyama, Asako; Chen, Min; Fane, Bentley A.

In: Journal of Virology, Vol. 81, No. 16, 08.2007, p. 8587-8592.

Research output: Contribution to journalArticle

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