Compression of DNA microarray images

Miguel Hernández-Cabronero, Michael W Marcellin, Joan Serra-Sagristà

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Abstract

The high spatial resolution of microarray image scanners results in relatively large image dimensions, easily exceeding 4000×13000 pixels in size in current commercial hardware. Due to the wide range of possible gene expression intensities, 16 bits to store each In in raw or tagged put of a single microarray experiment. The space requirements are multiplied when several experiments are performed as a part of a microarray study, as is usually the case. Therefore, the large amounts of data that are produced in laboratories around the world need to be efficiently stored and transmitted among computers in the same or in different centers. Data compression is the natural approach to this problem.

Original languageEnglish (US)
Title of host publicationMicroarray Image and Data Analysis
Subtitle of host publicationTheory and Practice
PublisherCRC Press
Pages195-225
Number of pages31
ISBN (Electronic)9781466586871
ISBN (Print)9781466586826
DOIs
StatePublished - Jan 1 2014

ASJC Scopus subject areas

  • Agricultural and Biological Sciences(all)
  • Biochemistry, Genetics and Molecular Biology(all)
  • Engineering(all)

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    Hernández-Cabronero, M., Marcellin, M. W., & Serra-Sagristà, J. (2014). Compression of DNA microarray images. In Microarray Image and Data Analysis: Theory and Practice (pp. 195-225). CRC Press. https://doi.org/10.1201/9781315215785