DNA microarray image coding

Miguel Hernández-Cabronero, Juan Muñoz-Gómez, Ian Blanes, Michael W Marcellin, Joan Serra-Sagristà

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Abstract

DNA micro arrays are useful to identify the function and regulation of a large number of genes in a single experiment, even whole genomes. In this work, we analyze the relationship between DNA micro array image histograms and the compression performance of loss less JPEG2000. Also, a reversible transform based on histogram swapping is proposed. Intensive experimental results using different coding parameters are discussed. Results suggest that this transform improves previous loss less JPEG2000 results on all DNA micro array image sets.

Original languageEnglish (US)
Title of host publicationData Compression Conference Proceedings
Pages32-41
Number of pages10
DOIs
StatePublished - 2012
Event2012 Data Compression Conference, DCC 2012 - Snowbird, UT, United States
Duration: Apr 10 2012Apr 12 2012

Other

Other2012 Data Compression Conference, DCC 2012
CountryUnited States
CitySnowbird, UT
Period4/10/124/12/12

Fingerprint

Microarrays
Image coding
DNA
Genes
Experiments

Keywords

  • image coding standards
  • JPEG2000
  • microarray image compression
  • microarray images

ASJC Scopus subject areas

  • Computer Networks and Communications

Cite this

Hernández-Cabronero, M., Muñoz-Gómez, J., Blanes, I., Marcellin, M. W., & Serra-Sagristà, J. (2012). DNA microarray image coding. In Data Compression Conference Proceedings (pp. 32-41). [6189234] https://doi.org/10.1109/DCC.2012.11

DNA microarray image coding. / Hernández-Cabronero, Miguel; Muñoz-Gómez, Juan; Blanes, Ian; Marcellin, Michael W; Serra-Sagristà, Joan.

Data Compression Conference Proceedings. 2012. p. 32-41 6189234.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hernández-Cabronero, M, Muñoz-Gómez, J, Blanes, I, Marcellin, MW & Serra-Sagristà, J 2012, DNA microarray image coding. in Data Compression Conference Proceedings., 6189234, pp. 32-41, 2012 Data Compression Conference, DCC 2012, Snowbird, UT, United States, 4/10/12. https://doi.org/10.1109/DCC.2012.11
Hernández-Cabronero M, Muñoz-Gómez J, Blanes I, Marcellin MW, Serra-Sagristà J. DNA microarray image coding. In Data Compression Conference Proceedings. 2012. p. 32-41. 6189234 https://doi.org/10.1109/DCC.2012.11
Hernández-Cabronero, Miguel ; Muñoz-Gómez, Juan ; Blanes, Ian ; Marcellin, Michael W ; Serra-Sagristà, Joan. / DNA microarray image coding. Data Compression Conference Proceedings. 2012. pp. 32-41
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