TY - JOUR
T1 - DR-TAMAS
T2 - Diffeomorphic Registration for Tensor Accurate Alignment of Anatomical Structures
AU - Irfanoglu, M. Okan
AU - Nayak, Amritha
AU - Jenkins, Jeffrey
AU - Hutchinson, Elizabeth B.
AU - Sadeghi, Neda
AU - Thomas, Cibu P.
AU - Pierpaoli, Carlo
N1 - Funding Information:
This research was supported by the Intramural Research Program of the National Institute of Child Health and Human Development (NICHD), National Institutes of Health (NIH) . Support included funding from the Department of Defense through the Henry Jackson Foundation (HJF Award#: W81XWH-13-2-0019 ) with the U.S. Army Medical Research Acquisition Activity , 820 Chandler Street, Fort Detrick, Maryland, 21702-5014, being the awarding office. The contents of this work do not necessarily reflect the position or the policy of the government, and no official endorsement should be inferred. Special thanks go to Dr. Alex Martin, Section on Cognitive Neuropsychology, NIMH, for providing the MRI data used for the Atlas Set, Dr. Filippo Arrigoni of the Eugenio Medea Institute in Bosisio Parini, Italy, for providing the diffusion tensor data acquired on the HSP SPG11 subject, and Drs. Susan Schwerin and Sharon Juliano who are partner investigators in the Ferret study from which a sample dataset was used in this work. We also thank Liz Salak for editing this manuscript.
Publisher Copyright:
© 2016 Elsevier Inc.
PY - 2016/5/15
Y1 - 2016/5/15
N2 - In this work, we propose DR-TAMAS (Diffeomorphic Registration for Tensor Accurate alignMent of Anatomical Structures), a novel framework for intersubject registration of Diffusion Tensor Imaging (DTI) data sets. This framework is optimized for brain data and its main goal is to achieve an accurate alignment of all brain structures, including white matter (WM), gray matter (GM), and spaces containing cerebrospinal fluid (CSF). Currently most DTI-based spatial normalization algorithms emphasize alignment of anisotropic structures. While some diffusion-derived metrics, such as diffusion anisotropy and tensor eigenvector orientation, are highly informative for proper alignment of WM, other tensor metrics such as the trace or mean diffusivity (MD) are fundamental for a proper alignment of GM and CSF boundaries. Moreover, it is desirable to include information from structural MRI data, e.g., T1-weighted or T2-weighted images, which are usually available together with the diffusion data. The fundamental property of DR-TAMAS is to achieve global anatomical accuracy by incorporating in its cost function the most informative metrics locally. Another important feature of DR-TAMAS is a symmetric time-varying velocity-based transformation model, which enables it to account for potentially large anatomical variability in healthy subjects and patients. The performance of DR-TAMAS is evaluated with several data sets and compared with other widely-used diffeomorphic image registration techniques employing both full tensor information and/or DTI-derived scalar maps. Our results show that the proposed method has excellent overall performance in the entire brain, while being equivalent to the best existing methods in WM.
AB - In this work, we propose DR-TAMAS (Diffeomorphic Registration for Tensor Accurate alignMent of Anatomical Structures), a novel framework for intersubject registration of Diffusion Tensor Imaging (DTI) data sets. This framework is optimized for brain data and its main goal is to achieve an accurate alignment of all brain structures, including white matter (WM), gray matter (GM), and spaces containing cerebrospinal fluid (CSF). Currently most DTI-based spatial normalization algorithms emphasize alignment of anisotropic structures. While some diffusion-derived metrics, such as diffusion anisotropy and tensor eigenvector orientation, are highly informative for proper alignment of WM, other tensor metrics such as the trace or mean diffusivity (MD) are fundamental for a proper alignment of GM and CSF boundaries. Moreover, it is desirable to include information from structural MRI data, e.g., T1-weighted or T2-weighted images, which are usually available together with the diffusion data. The fundamental property of DR-TAMAS is to achieve global anatomical accuracy by incorporating in its cost function the most informative metrics locally. Another important feature of DR-TAMAS is a symmetric time-varying velocity-based transformation model, which enables it to account for potentially large anatomical variability in healthy subjects and patients. The performance of DR-TAMAS is evaluated with several data sets and compared with other widely-used diffeomorphic image registration techniques employing both full tensor information and/or DTI-derived scalar maps. Our results show that the proposed method has excellent overall performance in the entire brain, while being equivalent to the best existing methods in WM.
KW - Diffeomorphic image registration
KW - Diffusion tensor imaging
KW - Fiber tractography
UR - http://www.scopus.com/inward/record.url?scp=84960908679&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84960908679&partnerID=8YFLogxK
U2 - 10.1016/j.neuroimage.2016.02.066
DO - 10.1016/j.neuroimage.2016.02.066
M3 - Article
C2 - 26931817
AN - SCOPUS:84960908679
VL - 132
SP - 439
EP - 454
JO - NeuroImage
JF - NeuroImage
SN - 1053-8119
ER -