Dynamic data visualization with weave and brain choropleths

Dianne Patterson, Thomas Hicks, Andrew Dufilie, Georges Grinstein, Elena Plante

Research output: Contribution to journalArticle

1 Scopus citations

Abstract

This article introduces the neuroimaging community to the dynamic visualization workbench, Weave (https://www.oicweave.org/), and a set of enhancements to allow the visualization of brain maps. The enhancements comprise a set of brain choropleths and the ability to display these as stacked slices, accessible with a slider. For the first time, this allows the neuroimaging community to take advantage of the advanced tools already available for exploring geographic data. Our brain choropleths are modeled after widely used geographic maps but this mashup of brain choropleths with extant visualization software fills an important neuroinformatic niche. To date, most neuroinformatic tools have provided online databases and atlases of the brain, but not good ways to display the related data (e.g., behavioral, genetic, medical, etc). The extension of the choropleth to brain maps allows us to leverage general-purpose visualization tools for concurrent exploration of brain images and related data. Related data can be represented as a variety of tables, charts and graphs that are dynamically linked to each other and to the brain choropleths. We demonstrate that the simplified region-based analyses that underlay choropleths can provide insights into neuroimaging data comparable to those achieved by using more conventional methods. In addition, the interactive interface facilitates additional insights by allowing the user to filter, compare, and drill down into the visual representations of the data. This enhanced data visualization capability is useful during the initial phases of data analysis and the resulting visualizations provide a compelling way to publish data as an online supplement to journal articles.

Original languageEnglish (US)
Article numbere0139453
JournalPloS one
Volume10
Issue number9
DOIs
StatePublished - Sep 29 2015

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)
  • General

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    Patterson, D., Hicks, T., Dufilie, A., Grinstein, G., & Plante, E. (2015). Dynamic data visualization with weave and brain choropleths. PloS one, 10(9), [e0139453]. https://doi.org/10.1371/journal.pone.0139453