Extended genome sequences of penaeid shrimp infectious myonecrosis virus strains from Brazil and Indonesia

Sidrotun Naim, Feng-Jyu Tang-Nelson, May Yang, Donald V Lightner, Max L. Nibert

Research output: Contribution to journalArticle

5 Citations (Scopus)

Abstract

New sequencing studies of the nonsegmented dsRNA genome of penaeid shrimp infectious myonecrosis virus (IMNV), a tentatively assigned member of the family Totiviridae, identified previously unread sequences at both genome termini in three previously analyzed IMNV strains, one from Brazil (the prototype strain of IMNV) and two from Indonesia. The new sequence determinations add >600 nt to the 5′ end of the genomic plus strand of each strain, increasing the length of the 5′ nontranslated region to at least 469–472 nt and the length of the upstream open reading frame (ORF1) translation product by at least 48 aa. These new findings are similar to recent ones for two other IMNV strains (GenBank KF836757.1 and KJ556923.1) and thereby corroborate important amendments to the full-length IMNV genome sequence.

Original languageEnglish (US)
Pages (from-to)1579-1583
Number of pages5
JournalArchives of Virology
Volume160
Issue number6
DOIs
StatePublished - Jun 1 2015

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Penaeidae
Indonesia
Brazil
Genome
Viruses
Totiviridae
Nucleic Acid Databases
Open Reading Frames
Sequence Analysis

ASJC Scopus subject areas

  • Virology
  • Medicine(all)

Cite this

Extended genome sequences of penaeid shrimp infectious myonecrosis virus strains from Brazil and Indonesia. / Naim, Sidrotun; Tang-Nelson, Feng-Jyu; Yang, May; Lightner, Donald V; Nibert, Max L.

In: Archives of Virology, Vol. 160, No. 6, 01.06.2015, p. 1579-1583.

Research output: Contribution to journalArticle

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