Gallus expression in situ hybridization analysis: A chicken embryo gene expression database

Parker B Antin, S. Kaur, S. Stanislaw, S. Davey, J. H. Konieczka, T. A. Yatskievych, D. K. Darnell

Research output: Contribution to journalArticle

12 Citations (Scopus)

Abstract

With sequencing of the chicken genome largely completed, significant effort is focusing on gene annotation, including acquiring information about the patterns of gene expression. The chicken embryo is ideally suited to provide detailed temporal and spatial expression information through in situ hybridization gene expression analysis in vivo. We have developed the Gallus expression in situ hybridization analysis (GEISHA) database and user interface (http://geisha.arizona.edu) to serve as a centralized repository of in situ hybridization photos and metadata from chicken embryos. This report describes the design and implementation the GEISHA database and Web site and illustrates its usefulness for researchers in the biomedical and poultry science communities. Results from a recent comprehensive expression analysis of microRNA expression in chicken embryos are also presented.

Original languageEnglish (US)
Pages (from-to)1472-1477
Number of pages6
JournalPoultry Science
Volume86
Issue number7
StatePublished - Jul 1 2007

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Gallus
in situ hybridization
embryo (animal)
chickens
gene expression
poultry science
user interface
microRNA
researchers
genome
genes

Keywords

  • Chicken
  • Database
  • In situ hybridization

ASJC Scopus subject areas

  • Animal Science and Zoology

Cite this

Antin, P. B., Kaur, S., Stanislaw, S., Davey, S., Konieczka, J. H., Yatskievych, T. A., & Darnell, D. K. (2007). Gallus expression in situ hybridization analysis: A chicken embryo gene expression database. Poultry Science, 86(7), 1472-1477.

Gallus expression in situ hybridization analysis : A chicken embryo gene expression database. / Antin, Parker B; Kaur, S.; Stanislaw, S.; Davey, S.; Konieczka, J. H.; Yatskievych, T. A.; Darnell, D. K.

In: Poultry Science, Vol. 86, No. 7, 01.07.2007, p. 1472-1477.

Research output: Contribution to journalArticle

Antin, PB, Kaur, S, Stanislaw, S, Davey, S, Konieczka, JH, Yatskievych, TA & Darnell, DK 2007, 'Gallus expression in situ hybridization analysis: A chicken embryo gene expression database', Poultry Science, vol. 86, no. 7, pp. 1472-1477.
Antin PB, Kaur S, Stanislaw S, Davey S, Konieczka JH, Yatskievych TA et al. Gallus expression in situ hybridization analysis: A chicken embryo gene expression database. Poultry Science. 2007 Jul 1;86(7):1472-1477.
Antin, Parker B ; Kaur, S. ; Stanislaw, S. ; Davey, S. ; Konieczka, J. H. ; Yatskievych, T. A. ; Darnell, D. K. / Gallus expression in situ hybridization analysis : A chicken embryo gene expression database. In: Poultry Science. 2007 ; Vol. 86, No. 7. pp. 1472-1477.
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