Genetic analysis of bovine viral diarrhoea viruses from Australia

Timothy J. Mahony, Fiona M McCarthy, Jennifer L. Gravel, Bruce Corney, Peter L. Young, Stefan Vilcek

Research output: Contribution to journalArticle

54 Citations (Scopus)

Abstract

Eighty-nine bovine viral diarrhoea viruses (BVDV) from Australia have been genetically typed by sequencing of the 5′ untranslated region (5′-UTR) and for selected isolates the Npro region of the viral genome. Phylogenetic reconstructions indicated that all of the samples examined clustered within the BVDV type 1 genotype. Of the 11 previously described genetic groups of BVDV-1, 87 of the samples examined in this study clustered with the BVDV-1c, while two samples clustered with the BVDV-1a. Based on these analyses there appears to be limited genetic variation within the Australian BVDV field isolates. In addition, the phylogenetic reconstructions indicate that the clustering of Australian BVDV in the phylogenetic trees is not a result of geographic isolation.

Original languageEnglish (US)
Pages (from-to)1-6
Number of pages6
JournalVeterinary Microbiology
Volume106
Issue number1-2
DOIs
StatePublished - Mar 20 2005
Externally publishedYes

Fingerprint

Bovine Viral Diarrhea Viruses
Bovine viral diarrhea virus
genetic techniques and protocols
Bovine viral diarrhea virus 1
phylogeny
Viral Genome
5' Untranslated Regions
5' untranslated regions
sampling
Cluster Analysis
Genotype
genetic variation
genome
genotype

Keywords

  • 5′-UTR
  • Bovine viral diarrhoea virus
  • N
  • Phylogenetic reconstruction

ASJC Scopus subject areas

  • Animal Science and Zoology
  • Microbiology
  • veterinary(all)

Cite this

Genetic analysis of bovine viral diarrhoea viruses from Australia. / Mahony, Timothy J.; McCarthy, Fiona M; Gravel, Jennifer L.; Corney, Bruce; Young, Peter L.; Vilcek, Stefan.

In: Veterinary Microbiology, Vol. 106, No. 1-2, 20.03.2005, p. 1-6.

Research output: Contribution to journalArticle

Mahony, Timothy J. ; McCarthy, Fiona M ; Gravel, Jennifer L. ; Corney, Bruce ; Young, Peter L. ; Vilcek, Stefan. / Genetic analysis of bovine viral diarrhoea viruses from Australia. In: Veterinary Microbiology. 2005 ; Vol. 106, No. 1-2. pp. 1-6.
@article{4b0b31a566ef4fc8991dfdc5682cd6d5,
title = "Genetic analysis of bovine viral diarrhoea viruses from Australia",
abstract = "Eighty-nine bovine viral diarrhoea viruses (BVDV) from Australia have been genetically typed by sequencing of the 5′ untranslated region (5′-UTR) and for selected isolates the Npro region of the viral genome. Phylogenetic reconstructions indicated that all of the samples examined clustered within the BVDV type 1 genotype. Of the 11 previously described genetic groups of BVDV-1, 87 of the samples examined in this study clustered with the BVDV-1c, while two samples clustered with the BVDV-1a. Based on these analyses there appears to be limited genetic variation within the Australian BVDV field isolates. In addition, the phylogenetic reconstructions indicate that the clustering of Australian BVDV in the phylogenetic trees is not a result of geographic isolation.",
keywords = "5′-UTR, Bovine viral diarrhoea virus, N, Phylogenetic reconstruction",
author = "Mahony, {Timothy J.} and McCarthy, {Fiona M} and Gravel, {Jennifer L.} and Bruce Corney and Young, {Peter L.} and Stefan Vilcek",
year = "2005",
month = "3",
day = "20",
doi = "10.1016/j.vetmic.2004.10.024",
language = "English (US)",
volume = "106",
pages = "1--6",
journal = "Veterinary Microbiology",
issn = "0378-1135",
publisher = "Elsevier",
number = "1-2",

}

TY - JOUR

T1 - Genetic analysis of bovine viral diarrhoea viruses from Australia

AU - Mahony, Timothy J.

AU - McCarthy, Fiona M

AU - Gravel, Jennifer L.

AU - Corney, Bruce

AU - Young, Peter L.

AU - Vilcek, Stefan

PY - 2005/3/20

Y1 - 2005/3/20

N2 - Eighty-nine bovine viral diarrhoea viruses (BVDV) from Australia have been genetically typed by sequencing of the 5′ untranslated region (5′-UTR) and for selected isolates the Npro region of the viral genome. Phylogenetic reconstructions indicated that all of the samples examined clustered within the BVDV type 1 genotype. Of the 11 previously described genetic groups of BVDV-1, 87 of the samples examined in this study clustered with the BVDV-1c, while two samples clustered with the BVDV-1a. Based on these analyses there appears to be limited genetic variation within the Australian BVDV field isolates. In addition, the phylogenetic reconstructions indicate that the clustering of Australian BVDV in the phylogenetic trees is not a result of geographic isolation.

AB - Eighty-nine bovine viral diarrhoea viruses (BVDV) from Australia have been genetically typed by sequencing of the 5′ untranslated region (5′-UTR) and for selected isolates the Npro region of the viral genome. Phylogenetic reconstructions indicated that all of the samples examined clustered within the BVDV type 1 genotype. Of the 11 previously described genetic groups of BVDV-1, 87 of the samples examined in this study clustered with the BVDV-1c, while two samples clustered with the BVDV-1a. Based on these analyses there appears to be limited genetic variation within the Australian BVDV field isolates. In addition, the phylogenetic reconstructions indicate that the clustering of Australian BVDV in the phylogenetic trees is not a result of geographic isolation.

KW - 5′-UTR

KW - Bovine viral diarrhoea virus

KW - N

KW - Phylogenetic reconstruction

UR - http://www.scopus.com/inward/record.url?scp=14544281975&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=14544281975&partnerID=8YFLogxK

U2 - 10.1016/j.vetmic.2004.10.024

DO - 10.1016/j.vetmic.2004.10.024

M3 - Article

C2 - 15737468

AN - SCOPUS:14544281975

VL - 106

SP - 1

EP - 6

JO - Veterinary Microbiology

JF - Veterinary Microbiology

SN - 0378-1135

IS - 1-2

ER -