Abstract
We present an extension of the Minimum Information about any (x) Sequence (MIxS) standard for reporting sequences of uncultivated virus genomes. Minimum Information about an Uncultivated Virus Genome (MIUViG) standards were developed within the Genomic Standards Consortium framework and include virus origin, genome quality, genome annotation, taxonomic classification, biogeographic distribution and in silico host prediction. Community-wide adoption of MIUViG standards, which complement the Minimum Information about a Single Amplified Genome (MISAG) and Metagenome-Assembled Genome (MIMAG) standards for uncultivated bacteria and archaea, will improve the reporting of uncultivated virus genomes in public databases. In turn, this should enable more robust comparative studies and a systematic exploration of the global virosphere.
| Original language | English (US) |
|---|---|
| Pages (from-to) | 29-37 |
| Number of pages | 9 |
| Journal | Nature biotechnology |
| Volume | 37 |
| Issue number | 1 |
| DOIs | |
| State | Published - Jan 1 2019 |
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ASJC Scopus subject areas
- Biotechnology
- Bioengineering
- Applied Microbiology and Biotechnology
- Molecular Medicine
- Biomedical Engineering
Cite this
Minimum information about an uncultivated virus genome (MIUVIG). / Roux, Simon; Adriaenssens, Evelien M.; Dutilh, Bas E.; Koonin, Eugene V.; Kropinski, Andrew M.; Krupovic, Mart; Kuhn, Jens H.; Lavigne, Rob; Brister, J. Rodney; Varsani, Arvind; Amid, Clara; Aziz, Ramy K.; Bordenstein, Seth R.; Bork, Peer; Breitbart, Mya; Cochrane, Guy R.; Daly, Rebecca A.; Desnues, Christelle; Duhaime, Melissa B.; Emerson, Joanne B.; Enault, François; Fuhrman, Jed A.; Hingamp, Pascal; Hugenholtz, Philip; Hurwitz, Bonnie L; Ivanova, Natalia N.; Labonté, Jessica M.; Lee, Kyung Bum; Malmstrom, Rex R.; Martinez-Garcia, Manuel; Mizrachi, Ilene Karsch; Ogata, Hiroyuki; Páez-Espino, David; Petit, Marie Agnès; Putonti, Catherine; Rattei, Thomas; Reyes, Alejandro; Rodriguez-Valera, Francisco; Rosario, Karyna; Schriml, Lynn; Schulz, Frederik; Steward, Grieg F.; Sullivan, Matthew; Sunagawa, Shinichi; Suttle, Curtis A.; Temperton, Ben; Tringe, Susannah G.; Thurber, Rebecca Vega; Webster, Nicole S.; Whiteson, Katrine L.; Wilhelm, Steven W.; Wommack, K. Eric; Woyke, Tanja; Wrighton, Kelly C.; Yilmaz, Pelin; Yoshida, Takashi; Young, Mark J.; Yutin, Natalya; Allen, Lisa Zeigler; Kyrpides, Nikos C.; Eloe-Fadrosh, Emiley A.
In: Nature biotechnology, Vol. 37, No. 1, 01.01.2019, p. 29-37.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Minimum information about an uncultivated virus genome (MIUVIG)
AU - Roux, Simon
AU - Adriaenssens, Evelien M.
AU - Dutilh, Bas E.
AU - Koonin, Eugene V.
AU - Kropinski, Andrew M.
AU - Krupovic, Mart
AU - Kuhn, Jens H.
AU - Lavigne, Rob
AU - Brister, J. Rodney
AU - Varsani, Arvind
AU - Amid, Clara
AU - Aziz, Ramy K.
AU - Bordenstein, Seth R.
AU - Bork, Peer
AU - Breitbart, Mya
AU - Cochrane, Guy R.
AU - Daly, Rebecca A.
AU - Desnues, Christelle
AU - Duhaime, Melissa B.
AU - Emerson, Joanne B.
AU - Enault, François
AU - Fuhrman, Jed A.
AU - Hingamp, Pascal
AU - Hugenholtz, Philip
AU - Hurwitz, Bonnie L
AU - Ivanova, Natalia N.
AU - Labonté, Jessica M.
AU - Lee, Kyung Bum
AU - Malmstrom, Rex R.
AU - Martinez-Garcia, Manuel
AU - Mizrachi, Ilene Karsch
AU - Ogata, Hiroyuki
AU - Páez-Espino, David
AU - Petit, Marie Agnès
AU - Putonti, Catherine
AU - Rattei, Thomas
AU - Reyes, Alejandro
AU - Rodriguez-Valera, Francisco
AU - Rosario, Karyna
AU - Schriml, Lynn
AU - Schulz, Frederik
AU - Steward, Grieg F.
AU - Sullivan, Matthew
AU - Sunagawa, Shinichi
AU - Suttle, Curtis A.
AU - Temperton, Ben
AU - Tringe, Susannah G.
AU - Thurber, Rebecca Vega
AU - Webster, Nicole S.
AU - Whiteson, Katrine L.
AU - Wilhelm, Steven W.
AU - Wommack, K. Eric
AU - Woyke, Tanja
AU - Wrighton, Kelly C.
AU - Yilmaz, Pelin
AU - Yoshida, Takashi
AU - Young, Mark J.
AU - Yutin, Natalya
AU - Allen, Lisa Zeigler
AU - Kyrpides, Nikos C.
AU - Eloe-Fadrosh, Emiley A.
PY - 2019/1/1
Y1 - 2019/1/1
N2 - We present an extension of the Minimum Information about any (x) Sequence (MIxS) standard for reporting sequences of uncultivated virus genomes. Minimum Information about an Uncultivated Virus Genome (MIUViG) standards were developed within the Genomic Standards Consortium framework and include virus origin, genome quality, genome annotation, taxonomic classification, biogeographic distribution and in silico host prediction. Community-wide adoption of MIUViG standards, which complement the Minimum Information about a Single Amplified Genome (MISAG) and Metagenome-Assembled Genome (MIMAG) standards for uncultivated bacteria and archaea, will improve the reporting of uncultivated virus genomes in public databases. In turn, this should enable more robust comparative studies and a systematic exploration of the global virosphere.
AB - We present an extension of the Minimum Information about any (x) Sequence (MIxS) standard for reporting sequences of uncultivated virus genomes. Minimum Information about an Uncultivated Virus Genome (MIUViG) standards were developed within the Genomic Standards Consortium framework and include virus origin, genome quality, genome annotation, taxonomic classification, biogeographic distribution and in silico host prediction. Community-wide adoption of MIUViG standards, which complement the Minimum Information about a Single Amplified Genome (MISAG) and Metagenome-Assembled Genome (MIMAG) standards for uncultivated bacteria and archaea, will improve the reporting of uncultivated virus genomes in public databases. In turn, this should enable more robust comparative studies and a systematic exploration of the global virosphere.
UR - http://www.scopus.com/inward/record.url?scp=85055940945&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85055940945&partnerID=8YFLogxK
U2 - 10.1038/nbt.4306
DO - 10.1038/nbt.4306
M3 - Article
C2 - 30556814
AN - SCOPUS:85055940945
VL - 37
SP - 29
EP - 37
JO - Biotechnology
JF - Biotechnology
SN - 1087-0156
IS - 1
ER -