Pulsed-field gel electrophoresis for long-range restriction mapping.

Robert M. Gemmill; Richard Bolin; Hans Albertsen; Jeff P. Tomkins; Rod A. Wing

Pulsed-field gel electrophoresis for long-range restriction mapping.

Robert M. Gemmill, Richard Bolin, Hans Albertsen, Jeff P. Tomkins, Rod A. Wing

Research output: Contribution to journal › Article › peer-review

Abstract

This unit describes procedures for generating long-range restriction maps of genomic DNA and for analysis of large insert clones. The basic protocol details restriction digestion of agarose-embedded DNA, PFGE separation, Southern transfer, and hybridization. Support protocols describe the preparation of high-molecular-weight genomic DNA samples in agarose blocks and in agarose microbeads, respectively. Additional support protocols describe the preparation of DNA size standards from l phage and two yeast species, Saccharomyces cerevisiae and Schizosaccharomyces pombe. An alternative method of preparing S. cerevisiae size standards using lithium dodecyl sulfate (LiDS) solubilization is provided. The final protocol details the preparation of BAC DNA suitable for digestion, mapping, and sequencing.

Original language	English (US)
Pages (from-to)	Unit5.1
Journal	Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.]
Volume	Chapter 5
State	Published - Feb 2002
Externally published	Yes

ASJC Scopus subject areas

Genetics
Genetics(clinical)

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title = "Pulsed-field gel electrophoresis for long-range restriction mapping.",

abstract = "This unit describes procedures for generating long-range restriction maps of genomic DNA and for analysis of large insert clones. The basic protocol details restriction digestion of agarose-embedded DNA, PFGE separation, Southern transfer, and hybridization. Support protocols describe the preparation of high-molecular-weight genomic DNA samples in agarose blocks and in agarose microbeads, respectively. Additional support protocols describe the preparation of DNA size standards from l phage and two yeast species, Saccharomyces cerevisiae and Schizosaccharomyces pombe. An alternative method of preparing S. cerevisiae size standards using lithium dodecyl sulfate (LiDS) solubilization is provided. The final protocol details the preparation of BAC DNA suitable for digestion, mapping, and sequencing.",

author = "Gemmill, {Robert M.} and Richard Bolin and Hans Albertsen and Tomkins, {Jeff P.} and Wing, {Rod A.}",

year = "2002",

month = feb,

language = "English (US)",

volume = "Chapter 5",

pages = "Unit5.1",

journal = "Current Protocols in Human Genetics",

issn = "1934-8266",

publisher = "John Wiley and Sons Inc.",

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TY - JOUR

T1 - Pulsed-field gel electrophoresis for long-range restriction mapping.

AU - Gemmill, Robert M.

AU - Bolin, Richard

AU - Albertsen, Hans

AU - Tomkins, Jeff P.

AU - Wing, Rod A.

PY - 2002/2

Y1 - 2002/2

N2 - This unit describes procedures for generating long-range restriction maps of genomic DNA and for analysis of large insert clones. The basic protocol details restriction digestion of agarose-embedded DNA, PFGE separation, Southern transfer, and hybridization. Support protocols describe the preparation of high-molecular-weight genomic DNA samples in agarose blocks and in agarose microbeads, respectively. Additional support protocols describe the preparation of DNA size standards from l phage and two yeast species, Saccharomyces cerevisiae and Schizosaccharomyces pombe. An alternative method of preparing S. cerevisiae size standards using lithium dodecyl sulfate (LiDS) solubilization is provided. The final protocol details the preparation of BAC DNA suitable for digestion, mapping, and sequencing.

AB - This unit describes procedures for generating long-range restriction maps of genomic DNA and for analysis of large insert clones. The basic protocol details restriction digestion of agarose-embedded DNA, PFGE separation, Southern transfer, and hybridization. Support protocols describe the preparation of high-molecular-weight genomic DNA samples in agarose blocks and in agarose microbeads, respectively. Additional support protocols describe the preparation of DNA size standards from l phage and two yeast species, Saccharomyces cerevisiae and Schizosaccharomyces pombe. An alternative method of preparing S. cerevisiae size standards using lithium dodecyl sulfate (LiDS) solubilization is provided. The final protocol details the preparation of BAC DNA suitable for digestion, mapping, and sequencing.

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AN - SCOPUS:44049099467

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