Abstract
The Gene Ontology (GO) (http://www.geneontology .org) is a community bioinformatics resource that represents gene product function through the use of structured, controlled vocabularies. The number of GO annotations of gene products has increased due to curation efforts among GO Consortium (GOC) groups, including focused literature-based annotation and ortholog-based functional inference. The GO ontologies continue to expand and improve as a result of targeted ontology development, including the introduction of computable logical definitions and development of new tools for the streamlined addition of terms to the ontology. The GOC continues to support its user community through the use of e-mail lists, social media and web-based resources.
| Original language | English (US) |
|---|---|
| Pages (from-to) | D559-D564 |
| Journal | Nucleic acids research |
| Volume | 40 |
| Issue number | D1 |
| DOIs | |
| State | Published - Jan 2012 |
| Externally published | Yes |
ASJC Scopus subject areas
- Genetics
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The Gene Ontology : Enhancements for 2011. / Blake, J. A.; Dolan, M.; Drabkin, H.; Hill, D. P.; Ni, L.; Sitnikov, D.; Burgess, S.; Buza, T.; Gresham, C.; McCarthy, F.; Pillai, L.; Wang, H.; Carbon, S.; Lewis, S. E.; Mungall, C. J.; Gaudet, P.; Chisholm, R. L.; Fey, P.; Kibbe, W. A.; Basu, S.; Siegele, D. A.; McIntosh, B. K.; Renfro, D. P.; Zweifel, A. E.; Hu, J. C.; Brown, N. H.; Tweedie, S.; Alam-Faruque, Y.; Apweiler, R.; Auchinchloss, A.; Axelsen, K.; Argoud-Puy, G.; Bely, B.; Blatter, M. C.; Bougueleret, L.; Boutet, E.; Branconi-Quintaje, S.; Breuza, L.; Bridge, A.; Browne, P.; Chan, W. M.; Coudert, E.; Cusin, I.; Dimmer, E.; Duek-Roggli, P.; Eberhardt, R.; Estreicher, A.; Famiglietti, L.; Ferro-Rojas, S.; Feuermann, M.; Gardner, M.; Gos, A.; Gruaz-Gumowski, N.; Hinz, U.; Hulo, C.; Huntley, R.; James, J.; Jimenez, S.; Jungo, F.; Keller, G.; Laiho, K.; Legge, D.; Lemercier, P.; Lieberherr, D.; Magrane, M.; Martin, M. J.; Masson, P.; Moinat, M.; O'Donovan, C.; Pedruzzi, I.; Pichler, K.; Poggioli, D.; Porras Millán, P.; Poux, S.; Rivoire, C.; Roechert, B.; Sawford, T.; Schneider, M.; Sehra, H.; Stanley, E.; Stutz, A.; Sundaram, S.; Tognolli, M.; Xenarios, I.; Foulger, R.; Lomax, J.; Roncaglia, P.; Camon, E.; Khodiyar, V. K.; Lovering, R. C.; Talmud, P. J.; Chibucos, M.; Gwinn Giglio, M.; Dolinski, K.; Heinicke, S.; Livstone, M. S.; Stephan, R.; Harris, M. A.; Oliver, S. G.; Rutherford, K.; Wood, V.; Bahler, J.; Lock, A.; Kersey, P. J.; McDowall, M. D.; Staines, D. M.; Dwinell, M.; Shimoyama, M.; Laulederkind, S.; Hayman, T.; Wang, S. J.; Petri, V.; Lowry, T.; D'Eustachio, P.; Matthews, L.; Amundsen, C. D.; Balakrishnan, R.; Binkley, G.; Cherry, J. M.; Christie, K. R.; Costanzo, M. C.; Dwight, S. S.; Engel, S. R.; Fisk, D. G.; Hirschman, J. E.; Hitz, B. C.; Hong, E. L.; Karra, K.; Krieger, C. J.; Miyasato, S. R.; Nash, R. S.; Park, J.; Skrzypek, M. S.; Weng, S.; Wong, E. D.; Berardini, T. Z.; Li, D.; Huala, E.; Slonim, D.; Wick, H.; Thomas, P.; Chan, J.; Kishore, R.; Sternberg, P.; Van Auken, K.; Howe, D.; Westerfield, M.
In: Nucleic acids research, Vol. 40, No. D1, 01.2012, p. D559-D564.Research output: Contribution to journal › Article › peer-review
}
TY - JOUR
T1 - The Gene Ontology
T2 - Enhancements for 2011
AU - Blake, J. A.
AU - Dolan, M.
AU - Drabkin, H.
AU - Hill, D. P.
AU - Ni, L.
AU - Sitnikov, D.
AU - Burgess, S.
AU - Buza, T.
AU - Gresham, C.
AU - McCarthy, F.
AU - Pillai, L.
AU - Wang, H.
AU - Carbon, S.
AU - Lewis, S. E.
AU - Mungall, C. J.
AU - Gaudet, P.
AU - Chisholm, R. L.
AU - Fey, P.
AU - Kibbe, W. A.
AU - Basu, S.
AU - Siegele, D. A.
AU - McIntosh, B. K.
AU - Renfro, D. P.
AU - Zweifel, A. E.
AU - Hu, J. C.
AU - Brown, N. H.
AU - Tweedie, S.
AU - Alam-Faruque, Y.
AU - Apweiler, R.
AU - Auchinchloss, A.
AU - Axelsen, K.
AU - Argoud-Puy, G.
AU - Bely, B.
AU - Blatter, M. C.
AU - Bougueleret, L.
AU - Boutet, E.
AU - Branconi-Quintaje, S.
AU - Breuza, L.
AU - Bridge, A.
AU - Browne, P.
AU - Chan, W. M.
AU - Coudert, E.
AU - Cusin, I.
AU - Dimmer, E.
AU - Duek-Roggli, P.
AU - Eberhardt, R.
AU - Estreicher, A.
AU - Famiglietti, L.
AU - Ferro-Rojas, S.
AU - Feuermann, M.
AU - Gardner, M.
AU - Gos, A.
AU - Gruaz-Gumowski, N.
AU - Hinz, U.
AU - Hulo, C.
AU - Huntley, R.
AU - James, J.
AU - Jimenez, S.
AU - Jungo, F.
AU - Keller, G.
AU - Laiho, K.
AU - Legge, D.
AU - Lemercier, P.
AU - Lieberherr, D.
AU - Magrane, M.
AU - Martin, M. J.
AU - Masson, P.
AU - Moinat, M.
AU - O'Donovan, C.
AU - Pedruzzi, I.
AU - Pichler, K.
AU - Poggioli, D.
AU - Porras Millán, P.
AU - Poux, S.
AU - Rivoire, C.
AU - Roechert, B.
AU - Sawford, T.
AU - Schneider, M.
AU - Sehra, H.
AU - Stanley, E.
AU - Stutz, A.
AU - Sundaram, S.
AU - Tognolli, M.
AU - Xenarios, I.
AU - Foulger, R.
AU - Lomax, J.
AU - Roncaglia, P.
AU - Camon, E.
AU - Khodiyar, V. K.
AU - Lovering, R. C.
AU - Talmud, P. J.
AU - Chibucos, M.
AU - Gwinn Giglio, M.
AU - Dolinski, K.
AU - Heinicke, S.
AU - Livstone, M. S.
AU - Stephan, R.
AU - Harris, M. A.
AU - Oliver, S. G.
AU - Rutherford, K.
AU - Wood, V.
AU - Bahler, J.
AU - Lock, A.
AU - Kersey, P. J.
AU - McDowall, M. D.
AU - Staines, D. M.
AU - Dwinell, M.
AU - Shimoyama, M.
AU - Laulederkind, S.
AU - Hayman, T.
AU - Wang, S. J.
AU - Petri, V.
AU - Lowry, T.
AU - D'Eustachio, P.
AU - Matthews, L.
AU - Amundsen, C. D.
AU - Balakrishnan, R.
AU - Binkley, G.
AU - Cherry, J. M.
AU - Christie, K. R.
AU - Costanzo, M. C.
AU - Dwight, S. S.
AU - Engel, S. R.
AU - Fisk, D. G.
AU - Hirschman, J. E.
AU - Hitz, B. C.
AU - Hong, E. L.
AU - Karra, K.
AU - Krieger, C. J.
AU - Miyasato, S. R.
AU - Nash, R. S.
AU - Park, J.
AU - Skrzypek, M. S.
AU - Weng, S.
AU - Wong, E. D.
AU - Berardini, T. Z.
AU - Li, D.
AU - Huala, E.
AU - Slonim, D.
AU - Wick, H.
AU - Thomas, P.
AU - Chan, J.
AU - Kishore, R.
AU - Sternberg, P.
AU - Van Auken, K.
AU - Howe, D.
AU - Westerfield, M.
N1 - Funding Information: National Human Genome Research Institute (NHGRI) (P41 grant 5P41HG002273-09 to Gene Ontology Consortium) and European Union RTD Programme ‘Quality of Life and Management of Living Resources’ (QLRI-CT-2001-00981 and QLRI-CT-2001-00015 to GO and UniProtKB-GOA groups at EMBL-EBI). Funding for open access charge: National Human Genome Research Institute (NHGRI) (P41 grant 5P41HG002273-09).
PY - 2012/1
Y1 - 2012/1
N2 - The Gene Ontology (GO) (http://www.geneontology .org) is a community bioinformatics resource that represents gene product function through the use of structured, controlled vocabularies. The number of GO annotations of gene products has increased due to curation efforts among GO Consortium (GOC) groups, including focused literature-based annotation and ortholog-based functional inference. The GO ontologies continue to expand and improve as a result of targeted ontology development, including the introduction of computable logical definitions and development of new tools for the streamlined addition of terms to the ontology. The GOC continues to support its user community through the use of e-mail lists, social media and web-based resources.
AB - The Gene Ontology (GO) (http://www.geneontology .org) is a community bioinformatics resource that represents gene product function through the use of structured, controlled vocabularies. The number of GO annotations of gene products has increased due to curation efforts among GO Consortium (GOC) groups, including focused literature-based annotation and ortholog-based functional inference. The GO ontologies continue to expand and improve as a result of targeted ontology development, including the introduction of computable logical definitions and development of new tools for the streamlined addition of terms to the ontology. The GOC continues to support its user community through the use of e-mail lists, social media and web-based resources.
UR - http://www.scopus.com/inward/record.url?scp=84859699831&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84859699831&partnerID=8YFLogxK
U2 - 10.1093/nar/gkr1028
DO - 10.1093/nar/gkr1028
M3 - Article
C2 - 22102568
AN - SCOPUS:84859699831
VL - 40
SP - D559-D564
JO - Nucleic Acids Research
JF - Nucleic Acids Research
SN - 0305-1048
IS - D1
ER -